Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03683 ATGATGGCAACTTCTTCGCTGGTCCGCAGTATTCAGAGAGCTTCCTCTGTTCTTAGATTCTCGTATTCGACCTCCTTTATGTTCTATCCCAGGTCAGTTGGGAGGACCCAAATACCTGTGTGCCCTCCATTCAGGCACTGTGTCCCACTCATGAAGCAAGGTTGTTTGTGGGGTTTCAGAGAGTTGAGTTATGGCACGGTTAATCTTGTAATAACGGAAGGGAAGACAAAGTTTGAGACTCATGAGGTTGAGCCTCCAAAGAAAGACAAATGGAAGACCAAGAAGAGGCTGAAGATGCAGAGGAAGAGAGACAAGGAGAAGAGGAAAGCAGCAAATAGGAGAGATCCCCGTCGACTTGGTGTCAAAGGGAAGAAGAAGAAGCAGAAATTTGCCAATGCGGATGAGAGAATCAAGTACAAGATTGAAAAAGCCAGAATTAAGGAAGCATTGCTCATTGAAAGACTCAAACGATATGAAGTTCCTAAACTTCAGGGCCCTGTTGTAAAACCAGATGGCCTGACAGGGGAGGAACGGTTTTATTTGAAGAAAATGGCTCAGAAGAGTTCTAATTATCTACAAGTTGGCAGAAGGGGATTATTTGGAGGGGTTATTCTAAATATGCATATGCATTGGAAGAAGCATGAGACTGTTAAGGTCATATGCAAGCCCTGTAAACCTGGTCAAGTACATGACTATGCACAAGAACTTGCCAGATTGAGTGGTGGTATCCCAATTCACATAATTGGAGATGACACTATAATATTTTATCGCGGAAAGAACTATGTACAGCCTGACATTATGTCACCAATAGATACATTATCCAAGAAAAAGGCACTTGAAAAATCCAAGTATGAGCAATCACTTGAGTCAGTCAGACGCTTCATTGCTATTGCTGAGAAAGAATTAGAACTATATTACAGACACGTTGCACTTTATGGTGATCCAAACAACCGTAATCCCTTGTCAATACTGGACGGTCCAAGTGGAAGTTCCAGGGAAAAAGGGAATCGTGGAATTCATGATGAAAAAAACCTTGGTTTTAGTAGTAGTGATTATTTTTCAGCCGATCTTTCAGAGAGAGAAGGAGTTTCCACAGAGATGGAGCTTTCAGAAGTTGAAGATAATTTTGAAAATGGAAACTTGTCAACGAATGAATCAGATTCTGAAGAACACAGCATGTTGGATTCTGATGATGATCAAGAAAGAGAGGTATATTTTACTAAAATGCAAGAAAAAAGTGTATGTTCCACCAAAGGTTCATCATCAATGTCTAAACATAGCCACCATTTTAATAATCAATGTTTATTATCCGAACAAATTCCCATCACTGGAGATTAG 1338 0.4043 MMATSSLVRSIQRASSVLRFSYSTSFMFYPRSVGRTQIPVCPPFRHCVPLMKQGCLWGFRELSYGTVNLVITEGKTKFETHEVEPPKKDKWKTKKRLKMQRKRDKEKRKAANRRDPRRLGVKGKKKKQKFANADERIKYKIEKARIKEALLIERLKRYEVPKLQGPVVKPDGLTGEERFYLKKMAQKSSNYLQVGRRGLFGGVILNMHMHWKKHETVKVICKPCKPGQVHDYAQELARLSGGIPIHIIGDDTIIFYRGKNYVQPDIMSPIDTLSKKKALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPNNRNPLSILDGPSGSSREKGNRGIHDEKNLGFSSSDYFSADLSEREGVSTEMELSEVEDNFENGNLSTNESDSEEHSMLDSDDDQEREVYFTKMQEKSVCSTKGSSSMSKHSHHFNNQCLLSEQIPITGD. 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03683 445 MobiDBLite consensus disorder prediction 81 129 - -
Seca4g03683 445 SUPERFAMILY YhbY-like 173 265 IPR035920 -
Seca4g03683 445 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 63 431 IPR040286 -
Seca4g03683 445 Gene3D - 173 274 IPR035920 -
Seca4g03683 445 MobiDBLite consensus disorder prediction 317 343 - -
Seca4g03683 445 SMART CRS1_YhbY_2 173 257 IPR001890 GO:0003723
Seca4g03683 445 MobiDBLite consensus disorder prediction 358 399 - -
Seca4g03683 445 Coils Coil 94 114 - -
Seca4g03683 445 Pfam CRS1 / YhbY (CRM) domain 173 257 IPR001890 GO:0003723
Seca4g03683 445 ProSiteProfiles CRM domain profile. 171 268 IPR001890 GO:0003723
Seca4g03683 445 MobiDBLite consensus disorder prediction 91 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03683 Seca-Chr4 64117565 64127255 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03683 - - gmx:100796393 623.624