Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03675 ATGGGGAAGCCTTTGTTTTATGAGATCTTGGAAAAACCAGCCACAAGTTGTCTTATAGGGATATGCAGTGCGATCTGGTTCTACATTCAGAAGAAAAATATTGGCTATTCTCATGTGGGTCTGAGTTATGAGGCTGCCATAGAAGGGCAACACTGGAGGATAATAACCTCTGCCTTTTCCCATATAAGTGTTATTCATCTTGTTTTTAATATGAGTGCACTTTGGAGTCTTGGGGTGGTAGAGCAGCTAGGCCACATAGGCCTTGGTGTTGAGTACTATTTGCAGTACACACTTGTGTTGGTTGTTTTATCAGGAGTGCTGGTTCTGGCCATGTATCACTTGTTGATTCAAAGATTCAAGCTTGAGTATTTTCGTCGCGTGACTGCTGTTGGGTATTCTTGTGTTGTTTTTGGGTGGATGACAATTCTTTCTGTGAAGCAACCTTCTTCAAAGTTGGATCTCTTTGGATTTCTTTCTCTCCCTATCAGTTTTGCGCCATTTGAATCACTTATTTTCACTTCAATCATTGTTCCTCAGGCAAGTTTTCTTGGCCATTTATCAGGGATTGTTGTTGGATATGCTATAGCATGGGGTTTGATTCATGGGATGAGCAATTACTGGGCACTTTCCTTATTGGGTTGGATTGTACTTGTCTTTATTGTTAGTTTGAAGAGATCTGGTGCACTTGACCTAAGTTTCCTTGAGATTGAATCTGTTACTGATCCCTCCTTACCATCTGTGCGGTTTTTGGCATCTGGCAATGGCAGAACCCTGCGGATGAGTGCATTGCCAGATGGAAATGTTGAACTTGTTTAA 816 0.4154 MGKPLFYEILEKPATSCLIGICSAIWFYIQKKNIGYSHVGLSYEAAIEGQHWRIITSAFSHISVIHLVFNMSALWSLGVVEQLGHIGLGVEYYLQYTLVLVVLSGVLVLAMYHLLIQRFKLEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQASFLGHLSGIVVGYAIAWGLIHGMSNYWALSLLGWIVLVFIVSLKRSGALDLSFLEIESVTDPSLPSVRFLASGNGRTLRMSALPDGNVELV. 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03675 271 Pfam Rhomboid family 48 201 IPR022764 GO:0004252|GO:0016020
Seca4g03675 271 Gene3D - 10 199 IPR035952 -
Seca4g03675 271 PANTHER RHOMBOID PROTEASE 13 208 - -
Seca4g03675 271 SUPERFAMILY Rhomboid-like 13 199 IPR035952 -
Seca4g03675 271 FunFam RHOMBOID-like protein 13 9 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03675 Seca-Chr4 63549819 63550634 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03675 - - gmx:100818954 505.753