Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03621 ATGGCTTCACTTCTTAAAAAACTGAGGCCTGGTGTGCCTTCAGTTCATGATGATGGTGGTGATTACAGCTTTGAGTACTCTTTTGCAGAGGAATACAAAGGACCTCCTCTAAGTTACTCTATCCCTGAAGCATCTCCTTTCAACCTTGATCAAATCCCACTTGCCCCTATTGCTCCTTCTCCTCCTCATCACTTCTCACTCCCAATTATCCAACCTGTCAGAAAAACCAATGCCACAAACCCCAAACTCCCTAGTACAGTTTCTCTTCCTTCTTCAAATTCTCTGCCTCCTGCTCTTGAATCATCAAACTCTGAAGTGGAGTTGGAGGTTCCTTTTGGTGATGATGACAAACATGACACAGGATTTCATGGTCACATTGCTTCATCAAGCTCTAGTTCTGTTTCTTGTGAGATAGTTTCATGCAAAGAAGAGGATTATGGACATGTCAAACGGCCTTCTGGTGTGACCTTTCGTGATCCTGAGTCAAATGACACGGTGGATGATGAAGAGTTTGTTGATTCTCCGAGTGGGAAAAGTAGGACTACCACTGTGAATTCTGTGAAGCCACATGCTGTGAGAGGTGGGAAGAAAGGCACATGCTATCGATGCCTTAAAGGGAATCGTCTAACTGGGAGAGAGGTTTGCATTGTTTGCAGTGCAAAGTATTGCCGCAATTGTGTCCTTAGAGCAATGGGGTCCATGCCAGAAGGGAGAAAATGTGTTACCTGCATTGGTTACAGAATTGATGAGAACAAGCGGGGAAAACTTGGTAAGTTTTCTAGGATGCTCAAGCATTTGTTGTCTAAGATGGAAGTAAAACAAATCATGCAAGCTGAAATGTTTTGTGAAGCAAATCAAATACCAGCAGAGCATGTTTGTGTGAATAGTGAGCCTCTTGATTGGGATCAGCTCATGTCACTCCTGAGCTGTCCAAACCCACCAAAAGGATTGAAACCTGGTTTCTATTGGTATGATAAAGCATCTGGCTTTTGGGGAAAGGAAGGTCAAAGGCCATGTCAAATTATCAGCCCCCAGCTGGAGATTGGGGGTCACTTGCAGAGAAATGCAAGCGGTGGAAAGACAAATGTAACTATAAATGGTAGAGAGGTTACTAAAGAAGAGCTCAGGATATTGAAGTGGGCAGGAGTGCCGTGTGAAGGAACAACTGACTTTTGGGTGAGTCCTGATGGATCCTACATGGAAGTGGGACAGAGGAATGTCAAGGGGCGTATATGGGATAAGCATACAACGAAGCTAGCTTCTGCAATTCTGTCACTGCCAGTTCCTCGTAGCTCTGTGACTCCTTCTGGTGAAGGAGAAAATGTAGTTAGCCAATACAATTTTCAACAGAAAATTTACAAATTTCTACTTGTTGGTTCTGACAAGTCTGGAACATGTACCATATTTAAACAGGCCAAGCTTCTGTATAAAGTTCCTTTCTCTGAAAATGAGCGCCAAAATATCAAGTTGGTAATTCAAAGCAACTTGTATAGGTACCTTGCTATACTGCTGGAGGCACGAGAAATGTTTGAAGAGAGTTTGTGCGAGAAAAGGAACAAACGGCATGTTGATGAATCAACTTCATCTGGTAAATGTTTTTTCCTTGGGTATACTGGAGAGATTATTGAGACAACAGTGTATTCCATTGGGAAAAGACTAAAAGCATTCTCAGATTGGCTACTCCAATACATGGTGTCAGGTAACTTGGATGTAATATTTCCAGCTGCTATACGTGAATATGCACCACTGGTGGAGGAGTTGTGGAGGGATGCAGCCATTCAGGCCACATACAACAGGAGAAATGAAATAAAAATGCTACCTAGATGTGCAAGTTATTTTTTAGAACGGGCTCTTGAGATATCCAAAATAGACTATGAACCTTTGGACATGGACATCTTGTACGCTGAGGGAATAACCTTATCCAACAGCCTTACTTCCATGGAATTCTCATTTCCCGTGTCAGGTGATGAGGACTCTTTGGACCCTGTGTATCAACATGATCCTTCTCTAAGGTACCAACTCATCAGAGTGAATCCAAGAAGCCTTGGAGAAAACTGCAAGTGGTTGGACATGTTTGAAGACACCAATGTAGTCTTATTCTCTGTGGCCTTATCTGACTATGATGAGTACACAGTAGACAGTAGTGGAGTTGCTACCAACAAAATTTTAGCAGCCAAGAATCTGTTTGAAAAAATCATTACTCACACAGTCTTCAAAAACAAGAAATTCCTTTTAATGCTGACCAAATTTGATCTGCTAGAGGAAAAAATTGAAACAGTACCCCTAACACAATGTGAATGGTTTAGTGACTTCCATCCAGTTATCAGCCACAATCACAACAGAGGTAGTATTAAGAAACATACCAATCACACTTCATTAGCTCTGCGTGCTTTTCAATATATTGCTATCAAGTTTAAGAGATTGTTCCATTCTCTCACTGGCCAAAAGATGTTTGTCTCACTGGTTTCTGGATTGGAACCTGATACTGTTGGTGAAGCTCTCAGATATGCTAGAGAGGTTATGGCATGGGAAAAATTGGAACCCTCTTTCAAAAATGAGAAGTCTGAGATAACTTCAACAACCATTGAGGAGGCAAGCACCTTATGA 2607 0.4189 MASLLKKLRPGVPSVHDDGGDYSFEYSFAEEYKGPPLSYSIPEASPFNLDQIPLAPIAPSPPHHFSLPIIQPVRKTNATNPKLPSTVSLPSSNSLPPALESSNSEVELEVPFGDDDKHDTGFHGHIASSSSSSVSCEIVSCKEEDYGHVKRPSGVTFRDPESNDTVDDEEFVDSPSGKSRTTTVNSVKPHAVRGGKKGTCYRCLKGNRLTGREVCIVCSAKYCRNCVLRAMGSMPEGRKCVTCIGYRIDENKRGKLGKFSRMLKHLLSKMEVKQIMQAEMFCEANQIPAEHVCVNSEPLDWDQLMSLLSCPNPPKGLKPGFYWYDKASGFWGKEGQRPCQIISPQLEIGGHLQRNASGGKTNVTINGREVTKEELRILKWAGVPCEGTTDFWVSPDGSYMEVGQRNVKGRIWDKHTTKLASAILSLPVPRSSVTPSGEGENVVSQYNFQQKIYKFLLVGSDKSGTCTIFKQAKLLYKVPFSENERQNIKLVIQSNLYRYLAILLEAREMFEESLCEKRNKRHVDESTSSGKCFFLGYTGEIIETTVYSIGKRLKAFSDWLLQYMVSGNLDVIFPAAIREYAPLVEELWRDAAIQATYNRRNEIKMLPRCASYFLERALEISKIDYEPLDMDILYAEGITLSNSLTSMEFSFPVSGDEDSLDPVYQHDPSLRYQLIRVNPRSLGENCKWLDMFEDTNVVLFSVALSDYDEYTVDSSGVATNKILAAKNLFEKIITHTVFKNKKFLLMLTKFDLLEEKIETVPLTQCEWFSDFHPVISHNHNRGSIKKHTNHTSLALRAFQYIAIKFKRLFHSLTGQKMFVSLVSGLEPDTVGEALRYAREVMAWEKLEPSFKNEKSEITSTTIEEASTL. 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03621 868 SMART galpha_1 433 825 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Seca4g03621 868 Gene3D - 487 638 IPR011025 GO:0007165
Seca4g03621 868 FunFam Extra-large guanine nucleotide-binding protein 3 481 636 - -
Seca4g03621 868 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 449 845 IPR027417 -
Seca4g03621 868 MobiDBLite consensus disorder prediction 76 101 - -
Seca4g03621 868 PRINTS Alpha G protein (transducin) signature 695 723 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Seca4g03621 868 PRINTS Alpha G protein (transducin) signature 743 752 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Seca4g03621 868 PRINTS Alpha G protein (transducin) signature 625 647 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Seca4g03621 868 PRINTS Alpha G protein (transducin) signature 454 469 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Seca4g03621 868 MobiDBLite consensus disorder prediction 152 183 - -
Seca4g03621 868 MobiDBLite consensus disorder prediction 76 103 - -
Seca4g03621 868 Pfam G-protein alpha subunit 450 840 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Seca4g03621 868 PANTHER OS01G0977800 PROTEIN 18 364 - -
Seca4g03621 868 Gene3D - 454 812 IPR027417 -
Seca4g03621 868 ProSiteProfiles G-alpha domain profile. 451 852 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Seca4g03621 868 SUPERFAMILY Transducin (alpha subunit), insertion domain 480 635 IPR011025 GO:0007165
Seca4g03621 868 FunFam Guanine nucleotide-binding protein subunit alpha 667 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03621 Seca-Chr4 62698781 62704393 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03621 - - gmx:100791124 1221.84