Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03617 ATGTTGAACTTGAAGAGGATGGATTTTGAAGACGAAGCAGTTCAATTGATCAACTCTGATTTCAGGGACCTGAGTCTAGCTGCTAATAAACTCGCAGAACATGTCATTAAACTTGGTGGCATAGGCTTTGGAGCCTCCTTTTTCGGATTGATTGCTGCCATTGCTGCTATTTATTTGTTGATTTTGGATCGTACAAACTGGAGGACAAACATTCTCACATCACTGCTCATTCCATACATTTTCTTCAGCTTGCCTTCAATAATTTTTGCCGTCTTCAGGGGAGAGATTGGGAAATGGATTGCTCTGATTGCTGTTGTATTAAGGCTTTTCATTCCTAGACATTTCCCTGATTGGCTGGAATTACCGGGTGCTTTGATTCTTCTTATCGTTGTAGCTCCTAGTCTATTTGCAAGCACCTTTAGAGACAACATTGTTGGGGTGGTAGTATGTCTTATCATCGCATGTTATTTGTTACAAGAGCACATTCGGGCATCTGGTGGTTTTAGAAACTCCTTCACTAAAGCCCATGGCATATCAAATTCCATTGGCATTATACTTCTGTTAGTCTATCCCATCTGGGCTCTAGTGGTCATACTCTTTTAG 603 0.4096 MLNLKRMDFEDEAVQLINSDFRDLSLAANKLAEHVIKLGGIGFGASFFGLIAAIAAIYLLILDRTNWRTNILTSLLIPYIFFSLPSIIFAVFRGEIGKWIALIAVVLRLFIPRHFPDWLELPGALILLIVVAPSLFASTFRDNIVGVVVCLIIACYLLQEHIRASGGFRNSFTKAHGISNSIGIILLLVYPIWALVVILF. 201
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03617 200 Pfam Cold acclimation protein WCOR413 10 187 IPR008892 GO:0016020
Seca4g03617 200 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 11 197 IPR008892 GO:0016020
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca4g03617 Seca-Chr4 62583810 62587811 Dispersed/Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03617 - - gmx:100811430 296.975