Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03616 ATGGTCAACAAGCCCTTGCTTCTCGTTGGAAGAGTTTCTTCAGCTGGTAGGAACCCTGATTTTCAATTACTTATTGATGTTTATACTTTAATTAACAAGATGGACCATTTTGATTGGATAATGGAGACCTATTGCATCTTCAAGGGCTCCTCAATTGGATTTTGGCAAGGCCAAGTTGGGATATATAAAGAGAGTCTTCCACAGAACAAAGCAGCACCTCTGTTTGACAGGCTTGTGTTTGATAAGATAAAACAAGCATTAGGTGGACGAGTTCATATCCTGTTATCAGGAGCTGCCCCTTTGCCTCGGCACATGGAGGAGTTTTTTAGGGTCACTTTTGGAGCTACGTTGGCACAAGGATATGGTATGTGGTTGCATGTTAATCCACATGCATATGCATATGACTTATTGGCTTATTATCTTTTTAATGTGACAAGTCTTACTGAAAGTTGTGGCTTGAATCAGTGCCAGATATGGGATATGATGCACTATCCAATCAAGCCCGTGGAGAAATTTGCCTTAGAGGGAGGGAATACCTTGTTTTCTGGCTACCATAAGCGTCAAGATCTTACTGAAGAGGTCCTGGTTGATGGTTGGTTTCATACAGGAGAATATGTTGTTGTGGAGAATATTGAAAACAAGTACTTGCAGTGCCCTCTTATAGCATCACTTATAGGTTTTGAGCTGCTGAAAGCAGTTCATCTTGAACCACTTCCCTTTGACACAGAGAGATCTAATAACTCCAACATTCAAATTGAAGAGACCCAACCGCTCAAGCACTCTAAGGCATGTCTCATGTTCTGTGATCAACACCAACTTTATATTTCACTTTACAATACAGATTTATCTTCATCAGTAGTTTCCTTAACTTACTGA 876 0.403 MVNKPLLLVGRVSSAGRNPDFQLLIDVYTLINKMDHFDWIMETYCIFKGSSIGFWQGQVGIYKESLPQNKAAPLFDRLVFDKIKQALGGRVHILLSGAAPLPRHMEEFFRVTFGATLAQGYGMWLHVNPHAYAYDLLAYYLFNVTSLTESCGLNQCQIWDMMHYPIKPVEKFALEGGNTLFSGYHKRQDLTEEVLVDGWFHTGEYVVVENIENKYLQCPLIASLIGFELLKAVHLEPLPFDTERSNNSNIQIEETQPLKHSKACLMFCDQHQLYISLYNTDLSSSVVSLTY. 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03616 291 Gene3D - 71 217 IPR042099 -
Seca4g03616 291 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 69 204 - -
Seca4g03616 291 SUPERFAMILY Acetyl-CoA synthetase-like 82 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03616 Seca-Chr4 62580000 62583208 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03616 37 203 Acyl Lipid Metabolism Gene Families AT1G49430 33.772 9.61e-35 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03616 K01897 - gmx:100790068 192.971