Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03607 ATGAACACCCTGGAGGGCAGTGGTTTCACTGAAGAGCAAGAAGCTCTGGTTGTGAAGTCATGGAACGTAATGAAGAAGAATTCAGCTGAACTGGGTCTCAAATTTTTCTTGAAAATATTTGAGATTGCTCCATCTGCTCAGAATATGTTCTCATTTTTGAGAGACTCAGAAGTTCCTTTGGAGCAAAACCCCAAGCTCAAGCCCCATGCCATGTCTGTCTTTGTCATGACATGTGAATCAGCAGTTCAACTGCGGAAAGCTGGTAAAGTCACCGTCAGAGAATCAAACTTGAAAAAATTAGGTGCTACCCATTATAAATACGGTGTAGTAGCCGAGCACTTTGAGGTAACAAAGTTTGCACTTTTGGAGACCATAAAAGAAGCAGTGCCTGAAATGTGGTCACCGGCCATGAAGAATGCATGGGGAGAAGCTTATGATCAGCTGGTTGGTGCCATCAAATCTGAAATGAAACCCTCCTCTTAG 483 0.4327 MNTLEGSGFTEEQEALVVKSWNVMKKNSAELGLKFFLKIFEIAPSAQNMFSFLRDSEVPLEQNPKLKPHAMSVFVMTCESAVQLRKAGKVTVRESNLKKLGATHYKYGVVAEHFEVTKFALLETIKEAVPEMWSPAMKNAWGEAYDQLVGAIKSEMKPSS. 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03607 160 PANTHER LEGHEMOGLOBIN-RELATED 7 157 IPR001032 GO:0019825|GO:0020037
Seca4g03607 160 FunFam non-symbiotic hemoglobin 1 7 155 - -
Seca4g03607 160 CDD class1_nsHb-like 9 157 - -
Seca4g03607 160 Pfam Globin 34 152 IPR000971 GO:0020037
Seca4g03607 160 Gene3D Globins 8 155 IPR012292 GO:0019825|GO:0020037
Seca4g03607 160 ProSiteProfiles Globin family profile. 7 157 IPR000971 GO:0020037
Seca4g03607 160 SUPERFAMILY Globin-like 8 157 IPR009050 -
Seca4g03607 160 PRINTS Plant globin signature 10 27 - -
Seca4g03607 160 PRINTS Plant globin signature 128 154 - -
Seca4g03607 160 PRINTS Plant globin signature 63 91 - -
Seca4g03607 160 PRINTS Plant globin signature 35 55 - -
Seca4g03607 160 ProSitePatterns Plant hemoglobins signature. 63 74 IPR019824 GO:0019825|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03607 Seca-Chr4 62467945 62470026 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03607 - - cpap:110813708 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03607 4 62467945 62470026 Seca4g03607 4 62467945 62470026 ECH