Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03592 ATGAAAAGGAGAGTCATGGAAGAAGGATTAGAGAACATCAGTGAAGCTTCTTATGGGTCTAAAGTGGGACTGAGGGATCTAAAGCAAAGCATTGAATCCAAGAAGAGGCAGTACCATAATATGGATCTTCAAAGTTCTTTGACTCAAGAGATTCTACAGCTTCAAAAACGATTACAGCAACAATTTGTGATACGGCGTGCGTTAGAGAAAGCATGTTATCTGCCTTTTTCACAGGATGCTGCAGTAGAAAATTCAGTACCTGAGGCTGCAAAGGATTTGATTAAGGAAATTGGAATATTAGAATTAGAAGTCGTGTATTTGGAACAATATCTTCTCTCTTTGTATCGGAAAAGATTTGATGAACAAATTTCATCTCTATCAACCAAGGAAAGAAGATTGGAATTAGCTTCAGACATTGACAAAGGAACTTCTGCAGCACCTAGCAATGATGCTGTCTCTGACAAAGAAATTTGTGTTATGCACTCTAATCATCTCATTTCACCCAGTAATTCAGCTGGCCTTCAGCTCAAGGAATGTAATAACCAGTTAGAACCAGAAACTGTTTTAGATTCTAGTATTCATCGTTGTCACTCTGCATTATCACAACAAACAGCTTGCTCAATAGAAGCTTCTCCTGTGAACATTAAGACCAAAGCTGTAGAATGTTACCATTCTCTACCATTATCCATGCTAGAGCAAGCTCAGTGTGCTAAATCCAGTTCAACCAGCCTGGCAGAGCATCTTGGGAGTTGCTATGTTGATAATGTTCCAGAGACACCAAATTGGCTTTCTGAGGAGATGATTAAGTGCATATCAGCTATATATTGTGAACTTAACGAGCCACCTTTTCCTGGTCATAAAAATACTTCATCCCCTATTTCATTCTCATCATCTGGTCATGAGGTATCTTCACAGAGCCAGGGTAGTAAGTGGGGATCACAGTGGAAGAAGCCTTCATTCTTCAATTTAAACTCCAGTAACCCTTTCCATGTTAAAGGGTCAAAAGAATTTAGTGAACCTTATTGCTCAATGTTAAGGATTCAGCAACTAGGCACAGATAGTCAGAAATTAGATGAAATTAAGTACATGCTACGGAGATTTAGGTCACTTGTTTCTCGGCTTGAAGAAGTTAATCCTAGAAATATGAAGCATGAAGAAAAGCTAGCCTTTTGGATTAATGTTCACAATGCCTTAGCAATGCATGCCTTATTAGTTTATGGAATTTCAGCCAACAATGTCAAAAGAATGTCTTCGGTACTTAAGGCTGCATATAACATTGGGGGCCATACGATAAGTGTAGACATGATACAGAACTTCATTCTGGGATGCAGATTGCCTCGTCCAGGACAATGGCTACGGCAGTGGTTTCCTTCAAAGACAAAACCAAAGGTTAGAGATGCAAGAAAAGGATATGCTATACGACGTCAAGAACCTTTATTACTATTTGCTCTTTGCTCAGGAAGCCACTCTGATCCTGCGGTACGATTGTTCACATCCAAGAGGGTCTTGGAGGAGCTAGAATCTGCCAAAGAAGAATACCTTCAGTCCACCGTCACTGTAAACAAGGAACAGAAAATAGTTCTCCCGAAGATAGTTGATTCCTTTGCAAAAAGTTCAGGTCTAGGAGCATCTGATTTGGTGGAGATGGTTATGCCTTATAAACCTGATTCTCAAAGGAAGAGCATTCAAGAGGTTCAATCAAAGACAAGCTGGAAAGGCATTGAATTTACCCCGCATGATTTCACTTTCCATTACCTGTTTACAAAGGAATTAGCTTGGTAG 1782 0.3967 MKRRVMEEGLENISEASYGSKVGLRDLKQSIESKKRQYHNMDLQSSLTQEILQLQKRLQQQFVIRRALEKACYLPFSQDAAVENSVPEAAKDLIKEIGILELEVVYLEQYLLSLYRKRFDEQISSLSTKERRLELASDIDKGTSAAPSNDAVSDKEICVMHSNHLISPSNSAGLQLKECNNQLEPETVLDSSIHRCHSALSQQTACSIEASPVNIKTKAVECYHSLPLSMLEQAQCAKSSSTSLAEHLGSCYVDNVPETPNWLSEEMIKCISAIYCELNEPPFPGHKNTSSPISFSSSGHEVSSQSQGSKWGSQWKKPSFFNLNSSNPFHVKGSKEFSEPYCSMLRIQQLGTDSQKLDEIKYMLRRFRSLVSRLEEVNPRNMKHEEKLAFWINVHNALAMHALLVYGISANNVKRMSSVLKAAYNIGGHTISVDMIQNFILGCRLPRPGQWLRQWFPSKTKPKVRDARKGYAIRRQEPLLLFALCSGSHSDPAVRLFTSKRVLEELESAKEEYLQSTVTVNKEQKIVLPKIVDSFAKSSGLGASDLVEMVMPYKPDSQRKSIQEVQSKTSWKGIEFTPHDFTFHYLFTKELAW. 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03592 593 MobiDBLite consensus disorder prediction 287 311 - -
Seca4g03592 593 Pfam Leucine-zipper of ternary complex factor MIP1 42 121 IPR025757 -
Seca4g03592 593 Coils Coil 24 44 - -
Seca4g03592 593 PANTHER UNCHARACTERIZED 32 591 - -
Seca4g03592 593 Pfam Protein of unknown function, DUF547 379 514 IPR006869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03592 Seca-Chr4 62364481 62370300 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03592 - - gmx:100789011 975.696