Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03587 ATGCTAGAGCTACCTTTTGACGATGAGTGTTTTGATTTGGTTATTGAGAAAGGAACTATGGATGTTTTGTTCGTGGACAGTGGTGACCCATGGAATCCAAAGCCTGAAACTATATCCAAGGTCATGGCCACACTGAAAGGTGTTCACAGGATTTTGAAAGCTGATGGCACATTTATCTCAATAACTTTTGGCCAGCCACATTTCAGGCGTCCTATATTTAATGCACCAGATTTCAGCTGGTCTGTTGAGTGGACTACTTTTGGTGAAACCTTTCACTATTTTGTCTATGTTCTGAAGAAGGTTAGTCCATATAGACTTGCTCTTTATTTTTCTTATGATGATAAAACCAAATGTCTGTTTGTTGCTATATTAAGGTACTGCTACCAAGACTTGAACATACGAGTTCTATTGAAATCACCACATACCAATGGTTTTTATTGTGAATACTGA 450 0.38 MLELPFDDECFDLVIEKGTMDVLFVDSGDPWNPKPETISKVMATLKGVHRILKADGTFISITFGQPHFRRPIFNAPDFSWSVEWTTFGETFHYFVYVLKKVSPYRLALYFSYDDKTKCLFVAILRYCYQDLNIRVLLKSPHTNGFYCEY. 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03587 149 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 96 IPR029063 -
Seca4g03587 149 Gene3D Vaccinia Virus protein VP39 1 107 IPR029063 -
Seca4g03587 149 PANTHER SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 5 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03587 Seca-Chr4 62284497 62286769 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03587 K22857 - gmx:100807535 206.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03587 4 62284497 62286769 Seca4g03587 4 62284497 62286769 ECH