Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03584 ATGAAGGCTTTGAGTCCCATAAACTCCTCAAATCCATGTCTTCCCAAAACCCATTTCCTCAAAGTTCCTGTCTTTCACCTCTTCTTCAAATTCAAGCCATTCCCATACAATAACCATGGCGTAAAGAGAGCTCATACCCTCTCATTCACCATCAACTGCAAGCTGAAAAGCTCTCAAGATATCAAAAACAAGGGGAAGGGTGTGCCGCAGAAGATTGTCTTATCAGAATCGTCCCCTCCACCACTCACAGAGGATGATGACATCAATGGTGGCAGTGACAGTGGGGAAGTTCGGGTAACCTCAAAGAAAAAGGGAGGCCCTTCTGGGGTGGCCAACATGTTGAGGAAAAAGATATTGCAGATTCTCTCTAATTTGCCGTTGGCTATTGGGGAAATGTTTGCCATTGCTTCTTTAATGGCTTTGGGCACTTTTATTGATCAAGGTGAGGCCCCTGACTTTTATTTCCAGAAATACCCTGAAGATCATCCTGTGTTAGGATTTTTTACTTGGAGATGGGTTCTTGCCCTTGGTTTTGATCACATGTTTACATCCCCTATATTTCTTGGAATGTTGGCTCTCCTGGGTGCATCCCTCATGGCTTGCACTTACACAACACAGTTGCCGCTTATCAAGGTTGCAAGAAGATGGTCATTTTTGCACTCTGCTGAGTCCATACGTAAGCAGGAATTTTCAGAATCATTGCCAAGAGCATCAATCCAAGATGTTGGTACTATATTGATGGGAGCTGGATATGAGGTATTCTTGAAAGGACCATCTTTGTATGCTTTTCAAGGTCTTGCAGGTCGGCTGGCTCCTGTTGGAGTTCATATAGCACTGCTGTTGATAATGGCTGGAGGAACTTTAAGTGCTACTGGGAGCTTCAGAGGTTCAGTCACTGTGCCCCAGGGGCTGAATTTTGTTGTGGGAGATGTTCTAGGTCCTACTGGCTTTCTCTCCTCTCCGTCTGATGCTTTTAATACAGAGATTCATGTCAACAGATTCTACATGGATTATTATGATAGTGGAGAGGTTTCACAGTTCCACACTGATCTTTCTCTCTTTAACATGGATGGGAAAGAAGTAATGAGGAAAACCATTAGTGTAAATGATCCTTTAAGATATGGTGGTATCACCATATACCAGACAGATTGGAGTATTTCAGCTCTGCAAATTCTTAAGGACAATGAAGGACCTTATAACTTGGCTATGGCACCTCTAAAGATCAATGGAGATAAGAAACTTTTTGGTACTTTTCTACCCGTTGGAGATATTAACTCTCCTGATGTTAAGGGAATGTAA 1299 0.428 MKALSPINSSNPCLPKTHFLKVPVFHLFFKFKPFPYNNHGVKRAHTLSFTINCKLKSSQDIKNKGKGVPQKIVLSESSPPPLTEDDDINGGSDSGEVRVTSKKKGGPSGVANMLRKKILQILSNLPLAIGEMFAIASLMALGTFIDQGEAPDFYFQKYPEDHPVLGFFTWRWVLALGFDHMFTSPIFLGMLALLGASLMACTYTTQLPLIKVARRWSFLHSAESIRKQEFSESLPRASIQDVGTILMGAGYEVFLKGPSLYAFQGLAGRLAPVGVHIALLLIMAGGTLSATGSFRGSVTVPQGLNFVVGDVLGPTGFLSSPSDAFNTEIHVNRFYMDYYDSGEVSQFHTDLSLFNMDGKEVMRKTISVNDPLRYGGITIYQTDWSISALQILKDNEGPYNLAMAPLKINGDKKLFGTFLPVGDINSPDVKGM. 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03584 432 Pfam ResB-like family 127 391 IPR007816 -
Seca4g03584 432 MobiDBLite consensus disorder prediction 61 108 - -
Seca4g03584 432 PANTHER CYTOCHROME C BIOGENESIS PROTEIN CCS1, CHLOROPLASTIC 64 431 IPR023494 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03584 Seca-Chr4 62249157 62253160 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03584 28 432 Miscellaneous Gene Families AT1G49380 67.157 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03584 K07399 - gmx:100807003 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03584 4 62249157 62253160 Seca4g03584 4 62249157 62253160 ECH