Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03583 ATGTTCAATGAAAAGCAGAACTTGTCTTTGTCTGAGCTTGATGTTTCCAATCTGGGCGCAATTGTTAAAACTCTGAAAGATACTTCACATTATCATTCTAGTAAATTTGCAGACTCTGATATAGCATTGTTACTGAATTTGCTTCGATCATGGCCAATCGCAATGATATTTCCTGTCATTGATATTGTAAGGATGTTAGTTCTTCATCCAGATGGAGCTATTGTACTTCGCAAGCATTTTGAAGCTGAAAATGATATTCTAATGGAAGTGATTAAGAAAGTCACCATAAACCCGACAATTCCTGCAAATCTGTTGACCAGCATTCGTGCTGTGACTAATCTCTTTAAGAATTCGTGCTTCTACAACTGGTTGCAGAAACATCGTAGTGAGATTCTTGATTCTTTCTCAAGTTGTAGTTCATCTCCAAACAAAAATTTGCAGCTGTCCTACTCTACCTTGATACTGAATTATGCGGTGCTATTGATTGAATCAAAGGATCAAGAAGGTCAATCTCAAGTCCTATCAGCAGCTCTTGAGGTTGTTGAGGATGAAAATATTGAAGCTGATTCTAAATTTCGAGCTTTAGTTGCTGTTGGATCACTGATGCTTGAGGGTCTTGTTAAAAAAATAGCACTGGACTTTGATGTCTTGAACATTGCAAAAGCAGCTAAAGGTTCTAAGGAAGCCAAGATTGCTGAAGTTGGATCTGACATCGAGCTATTAACAAAGCAGAGCTAA 738 0.3767 MFNEKQNLSLSELDVSNLGAIVKTLKDTSHYHSSKFADSDIALLLNLLRSWPIAMIFPVIDIVRMLVLHPDGAIVLRKHFEAENDILMEVIKKVTINPTIPANLLTSIRAVTNLFKNSCFYNWLQKHRSEILDSFSSCSSSPNKNLQLSYSTLILNYAVLLIESKDQEGQSQVLSAALEVVEDENIEADSKFRALVAVGSLMLEGLVKKIALDFDVLNIAKAAKGSKEAKIAEVGSDIELLTKQS. 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03583 245 ProSiteProfiles PUL domain profile. 1 241 IPR013535 -
Seca4g03583 245 PANTHER PHOSPHOLIPASE A-2-ACTIVATING PROTEIN 13 199 - -
Seca4g03583 245 FunFam Phospholipase A-2-activating protein isoform A 1 242 - -
Seca4g03583 245 Pfam PUL domain 3 237 IPR013535 -
Seca4g03583 245 Gene3D - 1 241 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03583 Seca-Chr4 62242832 62247163 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03583 9 244 Acyl Lipid Metabolism Gene Families AT3G18860 69.915 4.71e-112 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03583 K14018 - gmx:100816481 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03583 4 62242832 62247163 Seca4g03583 4 62242832 62247163 ECH