Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03579 ATGGGAAGTCAAATGAGCAAGAAGAGCCCTGAAACTTCATCTGCTATAAACGAATTGCACTATAAAACTGAGCTCAGTTCGTATGAGGCTGCTTGCAAGCTTGATACTGATTTGCAGACCTTTGACACCACACTTCAAGCTCGAACAAATCAGGTCATCAATACTCTTGCAGTTGGTGTTGAAGTTCGATCTCTTTCTTTTGATTCTCTAAAACAAGTCACGGGATGTCTTCTGGAGATGAATCAGGAAGTTGTCAAGGTAATCTTGGAGTGCAAGAAAGATATATGGAAGAGCCAAGAACTGTTTGAACTGGTGGAAGAGTACTTTGAGAACAGTTTGCAAACACTAGATTTCTGCACTGCATTGGAGAAGTGCCTAAAACGAGCTCGGGACAGTCAATTGCTTATTCTTGTGGCTCTTCAACAGTTTGAGGAAGAATCAGAGTTAGGAGACAATCGCTATGTGAGGACATTACAAGAATTGAAGAATTTCAAGGCAGCTGGTGATCCTTTCACAGAAGAATTCTTCCAAATCTTCCAATCTGTTTATAAGCAGCAGATACTCATGCTTGAAAAGTTGCAAGTCAGAAAGAACAAGCTTGATAAGAAGCTGAAATATATTCATTCTTGGAGGAAGGTGTCAAGTATGATATTTGTAGCTACATTTGCTGCTGTCTTGATCTGCTCAGTTGTAGCAGCAGCTATTGCAGCTCCACCTGTTGCTGCTGCTTTGGCTGCTGCTACCTCAATCCCAATTGGTTCAATGGGAAAGTGGATTGACTCACTCTGGAAGAACTATGAAAATGCACTGAAAGGGCAGAAAGAAGTGATTAGTTCAATGCAAGCTGGCACCTATGTTGCTATAAAGGACTTGGATAACATCCGTATTCTCATTGATAGGTTGGAAGTTGAGATTGAATCTCTTTTGCACAATGTGGATTTTGCCATTGAAGAAGAAGCTGTCAAGGTTGCAATAAAGGAGATCAAGAAGAAGCTGGGAGTGTTTATGAAGAATGTTGAAGATTTAGGAGTTCAAGCTGATATCTGTAGCCGTGACATTAGAAGGGCAAGGACTGTGGTTCTGCAAAGAATCATAAAACATCCCCACAATTGA 1113 0.4088 MGSQMSKKSPETSSAINELHYKTELSSYEAACKLDTDLQTFDTTLQARTNQVINTLAVGVEVRSLSFDSLKQVTGCLLEMNQEVVKVILECKKDIWKSQELFELVEEYFENSLQTLDFCTALEKCLKRARDSQLLILVALQQFEEESELGDNRYVRTLQELKNFKAAGDPFTEEFFQIFQSVYKQQILMLEKLQVRKNKLDKKLKYIHSWRKVSSMIFVATFAAVLICSVVAAAIAAPPVAAALAAATSIPIGSMGKWIDSLWKNYENALKGQKEVISSMQAGTYVAIKDLDNIRILIDRLEVEIESLLHNVDFAIEEEAVKVAIKEIKKKLGVFMKNVEDLGVQADICSRDIRRARTVVLQRIIKHPHN. 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03579 370 Coils Coil 291 318 - -
Seca4g03579 370 PANTHER UPF0496 PROTEIN 3-RELATED 14 366 IPR007749 -
Seca4g03579 370 Pfam Protein of unknown function (DUF677) 38 364 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03579 Seca-Chr4 62198223 62199335 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03579 - - gmx:100811667 604.364