Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03577 ATGGCGAAGCTCATCTTGGTGTTTCTCGCTCTCATTCCTCTTCTCTGCAGTTCCTTCTCCCCTGAGAGACCCTCAGATCGGCGCATCCTCGTCTTGCTCGATGACTTCGCCGTCAAATCCTCCCACTCTCTCTTCTTCAAGTCTCTCCAATCTCGCGGCTTCGATCTCGATTTCAAGCTCGCCGACGACCCTAAGATTGCGCTCCAGAGATACGGCCAGTACCTCTACGATGCCTTAATTTTGTTTTGCCCTACCATCGAACGTTTTGGAGGATCCATTGATGCAGCTGCCGTTTTAGATTTTGTTGATTCCGGTCATGATTTGATAGTTGCTGCTGACAACAATGCATCTGATTTAATCCGGGAAATCGCCACCGAGTGTGGTGTGGACTTTGATGAGGATCCTGCTGCTATGGTTGTAGATCATTCTGGATATGCAGTCTCTGCTACCGAAGGGGATCATACGTTGATTGCTAGTGACGATTTTATCAAGTCTGATGTGATCTTGGGAAGCAAAAAAATTGAGGCAAGTGCAATGTTAATATACACAATATTCTTTTCTGATTTTTCTCATTGCATGAAACAGGCTCCAGTACTTTTCCAGGGGATTGGACATTCATTAAATCCTTCCAATAGCCTGGTTTTGAAAGTTCTCTCAGCATCTCCTACAGCCTTTTCTGCTAACCCAAAATCTAAATTGACAAGTCCTCCATCACTCACTGGATCTTCTATCTCATTAGTTTCAGTTATACAGGCAAGAAATAATGCTCGGATATTGATCTCTGGCTCATTGAGCATGTTCAGCAGCCGATTTTTCAGGTCAGGTGTGCAGAAGGCTGGGAGTCCAACTAAACACGACAAATCAGGTAATGAGCAGTTCTTGACTGAACTGAGCAAATGGGTTTTACATGAAAGAGGTCACCTCAAGGCGGTGAATGTGCAACACCATAAAGTTGGGGAAGTTGGTGAACCAGCCATCTATAGGATCAATGATGATTTGGAATACTCTGTTGAAATTTATGAGTGGTCTGGGACAACTTGGGAACCTTATGTAGCTGACGATGTTCAAGTACAATTTTACATGATGAGCCCCTATGTCTTGAAGACTCTATCAACTGACGGCAAGGGTCGTTATTTCACGTCATTTAAGGTTCCAGATGTCTATGGGGTTTTCCAATTCAAAGTTGAGTATGAAAAACTTGGATATACAAGCTTATCTTTATCAAAGCAGATTCCTGTTCGTCCCTTCAGACATAATGAGTACGAGAGATTTATACCAGCAGCTTATCCCTATTATGGAGCAGCATTTTCTATGATGGCAGGTTTCTTCATCTTCAGTGCTGTTCATCTATACAGCAAGTAG 1362 0.4332 MAKLILVFLALIPLLCSSFSPERPSDRRILVLLDDFAVKSSHSLFFKSLQSRGFDLDFKLADDPKIALQRYGQYLYDALILFCPTIERFGGSIDAAAVLDFVDSGHDLIVAADNNASDLIREIATECGVDFDEDPAAMVVDHSGYAVSATEGDHTLIASDDFIKSDVILGSKKIEASAMLIYTIFFSDFSHCMKQAPVLFQGIGHSLNPSNSLVLKVLSASPTAFSANPKSKLTSPPSLTGSSISLVSVIQARNNARILISGSLSMFSSRFFRSGVQKAGSPTKHDKSGNEQFLTELSKWVLHERGHLKAVNVQHHKVGEVGEPAIYRINDDLEYSVEIYEWSGTTWEPYVADDVQVQFYMMSPYVLKTLSTDGKGRYFTSFKVPDVYGVFQFKVEYEKLGYTSLSLSKQIPVRPFRHNEYERFIPAAYPYYGAAFSMMAGFFIFSAVHLYSK. 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03577 453 Pfam Oligosaccharyltransferase 48 kDa subunit beta 28 453 IPR005013 GO:0005789|GO:0018279
Seca4g03577 453 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE 48 KDA SUBUNIT 1 453 IPR005013 GO:0005789|GO:0018279
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03577 Seca-Chr4 62178531 62186542 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03577 K12670 - gmx:100803270 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03577 4 62178531 62186542 Seca4g03577 4 62178531 62186542 ECH