Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03572 ATGGGGAAAGGTGGTGGTTGCGTACCAAGCAAGAAAAAGGCACCAATTTCCGACCCAGAAAAGAATGATCCTGCAGTTAGTGTTGAAAGCCTAATCCCAGAAAATGATATAACAAGTACAAGCCGAGAGGGGCCACCACCACCACCCCAAGCAGAGAAAAAACTGAAGGTTTTCATCGTGTTCTACTCAACTTATGGCCATGTGGAGTCATTGGCAAGAACCTTGAAAAAAGGGGTTGATTCCATTGAAGGAGTTGAAGGGGTATTGTACCGTGTGGTGGAGACACTACCTAAGGAGGTCTTAGAACTCATGAAGGCACCTGAGAAGGATGATAAGGTGCCACTGATATCTGCAGAGAAATTGGTGGAAGCTGATGGGTTACTGTTTGGGTTTCCAACAAGGTATGGAAGCATGGCAGCACAGATGAAGGCGTTTTTTGATTCAACAGGTCAGTCGTGGAGGGAGCAGAAACTGGCTGGCGTGCCTGCTGGCTTCTTTGTTAGTACTGGCACTCAGGGTGGTGGTCAAGAAACCACAGCCTGGACAGCAATCACACAGTTAGTCCACCACGGCATGCTCTATGTTCCTATTGGCTATTCCTTTGGTGCTGGAATGTTCGAAATGGAGTCCATTAGAGGTGGATCTCCTTATGGTGCTGGTGTTTTTGCTGGCGATGGGTCAAGGCAAGCAAGTGAAACAGAGCTGGCCCTTGCAGAGTATCAAGGCAGGTACATGGCTACAATAGTCAAGAAGTTAGGCCAGAAAAGCTAG 771 0.4786 MGKGGGCVPSKKKAPISDPEKNDPAVSVESLIPENDITSTSREGPPPPPQAEKKLKVFIVFYSTYGHVESLARTLKKGVDSIEGVEGVLYRVVETLPKEVLELMKAPEKDDKVPLISAEKLVEADGLLFGFPTRYGSMAAQMKAFFDSTGQSWREQKLAGVPAGFFVSTGTQGGGQETTAWTAITQLVHHGMLYVPIGYSFGAGMFEMESIRGGSPYGAGVFAGDGSRQASETELALAEYQGRYMATIVKKLGQKS. 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03572 256 SUPERFAMILY Flavoproteins 56 252 IPR029039 -
Seca4g03572 256 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 56 254 - -
Seca4g03572 256 MobiDBLite consensus disorder prediction 1 49 - -
Seca4g03572 256 Gene3D - 53 253 IPR029039 -
Seca4g03572 256 FunFam NAD(P)H dehydrogenase (Quinone) FQR1-like 53 254 - -
Seca4g03572 256 Pfam NADPH-dependent FMN reductase 71 197 IPR005025 GO:0016491
Seca4g03572 256 NCBIfam NAD(P)H:quinone oxidoreductase, type IV 56 252 IPR010089 GO:0003955|GO:0010181
Seca4g03572 256 ProSiteProfiles Flavodoxin-like domain profile. 57 245 IPR008254 GO:0010181
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03572 Seca-Chr4 62122763 62124760 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03572 K03809 - gmx:100809530 438.343