Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03544 ATGATTGGGCGTAGAGAGAGAGAAGGACCCTTGATGAGGAACAACACGCATTCTCTGCGCAAATCAAGGGTCGTTACCGCCGTAGCAATTGGGATCCTTATTGGATGCATCTTCGCTTTCTTGTTCCCTAATGGGTTCTTCGTTTCTGACTCTCACACCCCTAATCGCCATCTCCCTCTCGCCGGATCCAAGACCCAGGAAAATTCAGCTGGATGTGAATCCTCAGATCGGGTCAACATGTTGAAATCAGAGTTTGTGGCAGTAACAGAGAAAAATGCTCAGCTAAAAAAACAGGTGAGGGAATTGACTGAAAGGCTTCGGCTTGCTGAGCAAGGGAAAGACCAGGCACAAAAGCAGTTTCTTTCATTGGGTAAACAGCATAAAGCTGGACCTTTTGGTACTGTCAAGGGATTAAGAACCAACCCTACAGTTGTTTCTGATGAATCTGTGAACCCAAGATTGGCAAAGATGTTAGAGAAAGTTGCAGTTAAACGAGAGCTCATAGTTGCACTTGCAAACACCAATGTGAAGGAGATGTTGGAAGTCTGGTTCACCAATATCAAGAGAGTTGGTATAACCAATTATCTAGTTGTTGCTTTAGATGATGAGATTGCAAAGTTTTGTGAATCAAATCAAGTGCCAGTGTACAAGAGAGACCCAGATAATGGTATTGATTCCATTGGAAAAACAGGAGGGAACCATGCTGTCTCTGGGCTTAAATTTCGCATTCTAAGAGAATTTTTGCAGTTGGGATATAGTGTACTTCTATCAGATGTTGACATTGTATATTTGCAGAATCCTTTTGATCATCTATATCGGGATTCAGATGTGGAGTCCATGAGTGATGGCCATAATAACATGACAGCTTATGGCTATAACGATGTCTTTGATGAACCTGCAATGGGTTGGGCTCGATATGCTCATACTATGAGGATATGGGTTTACAACTCTGGTTTCTTCTATATCAGACCAACCATCCCTTCAATTGAGCTTTTGGATCGTGTGGCAACACGACTTTCCAAGGAGAATGCATGGGACCAGGCTGTTTTCAATGAGGAACTCTTTTTCCCCTCACATCCTGGGTATGATGGGCTTCATGCTGCCAGAAGAACTATGGATATATATCTCTTCATGAACAGCAAGGTTCTGTTCAAGACAGTGAGAAATGATGCTAACCTCAGCAAATTGAAACCAGTAATTATTCACGTGAATTACCACCCTGATAAGCTTCCCCGAATGAAGGCAATTGTTGAATATTACGTTAATGGGAAGCAGGATGCTCTCAAACCTTTCCCTGAAGGCTCGGATTGA 1311 0.4279 MIGRREREGPLMRNNTHSLRKSRVVTAVAIGILIGCIFAFLFPNGFFVSDSHTPNRHLPLAGSKTQENSAGCESSDRVNMLKSEFVAVTEKNAQLKKQVRELTERLRLAEQGKDQAQKQFLSLGKQHKAGPFGTVKGLRTNPTVVSDESVNPRLAKMLEKVAVKRELIVALANTNVKEMLEVWFTNIKRVGITNYLVVALDDEIAKFCESNQVPVYKRDPDNGIDSIGKTGGNHAVSGLKFRILREFLQLGYSVLLSDVDIVYLQNPFDHLYRDSDVESMSDGHNNMTAYGYNDVFDEPAMGWARYAHTMRIWVYNSGFFYIRPTIPSIELLDRVATRLSKENAWDQAVFNEELFFPSHPGYDGLHAARRTMDIYLFMNSKVLFKTVRNDANLSKLKPVIIHVNYHPDKLPRMKAIVEYYVNGKQDALKPFPEGSD. 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03544 436 Pfam Nucleotide-diphospho-sugar transferase 192 410 IPR005069 -
Seca4g03544 436 SUPERFAMILY Nucleotide-diphospho-sugar transferases 168 367 IPR029044 -
Seca4g03544 436 PANTHER ARABINOSYLTRANSFERASE RRA3 1 436 IPR044290 GO:0016757|GO:0080147
Seca4g03544 436 Coils Coil 78 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03544 Seca-Chr4 61774589 61777108 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03544 K20783 - gmx:100804189 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03544 4 61774589 61777108 Seca4g03544 4 61774589 61777108 ECH