Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03543 ATGTCTTTACCAAGCCAGCAGGTTGGATTGGGACTGCTCTTTTGCCCTCTTAATTCCAACATTGTTGTTCGGACAGCATGCTGTTCTGTAGGGCTTGTGCTTCCCGTTTACTCTACATTCAAAGCTATTGAGAACAAAGATCCAAATGAGCAACACAGGTGGCTATTATATTGGGCAGCTTATGGATCTTTTAGTGTTGCAGAATTATTTGCAGAAAAAGTACTTTCCTGGATTCCACTCTATTATCATGTGAAGTTTGCGTTTCTTCTTTGGCTACAGCTTCCCACTATCAATGGGGCAAGACAACTGTATGCTAGTTACTTGTGTCCATTCCTGTTGAAGCATCAAGCTAGACTGGATCTGATTGTTGATTTTGTGTACGGTGAAATGGGTAAATTTATTAGTACACACCAAGCAGAATTTCACTTTGCAAGAACTCTTGTAATGAAGGTATTAGTGGCAGCAAATCAAATAATTAGGGATATCATTCATCCTGTTGAGAGGGAATCAAAGCGAACTGAAGGCCCAAAGAGGCAGGTTCAGAATTCAGAATCAGAAGTAGAAGATTAA 570 0.4018 MSLPSQQVGLGLLFCPLNSNIVVRTACCSVGLVLPVYSTFKAIENKDPNEQHRWLLYWAAYGSFSVAELFAEKVLSWIPLYYHVKFAFLLWLQLPTINGARQLYASYLCPFLLKHQARLDLIVDFVYGEMGKFISTHQAEFHFARTLVMKVLVAANQIIRDIIHPVERESKRTEGPKRQVQNSESEVED. 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03543 189 PANTHER HVA22-LIKE PROTEINS 28 137 IPR004345 -
Seca4g03543 189 MobiDBLite consensus disorder prediction 170 189 - -
Seca4g03543 189 Pfam TB2/DP1, HVA22 family 35 111 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03543 Seca-Chr4 61764700 61767978 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03543 K17279 - pop:7456388 270.781