Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03523 ATGGAAGAGAAGCTCATACAGCGATTGGAATCGGCGGTGTCGCGCTTGGAGGCACTATCCGCCGGATTCCACTCTGCCGCTTCGACGGCCGGCGGTGCCGACGCTCAGGATGCGGTGCTCGATCCGTCCGTTATCGCATTCGGCGATCTGATCGACCAGTATGTCGGTAGGCTTTCTCGTGCTGCCGAGATTATTGGTGGACAAGTCTTGGAGGTCACCAAAATCTTGCAGGCAGCTTTCGCTGTTCAGAAAGAGCTTTTGAGTAAACTCAAGCACACTCAGCAGAAGCCTGACCTTGCTGGGTTGGCTGAATTTCTGAAACCATTGAATGAAGTGATCACAAAAGCTACTGCATTGACAGAAGGAAGGAGGTCTGATTTTTTTAATCACTTGAAGGCTGCTGCTGACAGTCTCTCAGCTCTAGCATGGATTGCATACACAGGGAAGGATTGTGGTATGAGTATGCCCATTGCGCATGTGGAAGAAAGTTGGCAAATGGCTGAGTTTTACAGCAACAAGGTACTTGTAGAATACAGAAACAAAGACCCAAATCATGTTGAATGGGCCAAAGCTCTGAAAGAGTTGTATCTACCTGGTTTGAGGGATTACGTCAAGAGCTTTTATCCTTTAGGCCCTGTATGGAGTCCAACAGGAAAAATAATTGCTCCATCAAAAGCTCCTGCATCTGTTGCACCTGCTGCCCCTCCTCCTCCACCTGCTTCTCTCTTTAGTTCTGAATCATCTCAGGCTTCATCTTCTAAGCCAAAAGAGGGGATGTCTGCTGTTTTTCAACAACTCAGTTCAGGAAATGTCACTGCAGGTTTGAAAAAGGTTACGGCTGATATGAAGACTAAGAATCGCACAGATAAAACTGGAGTTGTTGCCAGTGGTGAAAAAGAAAGTCCGGCAGCTTCACGTGTATCTTCTAAAGCAGGACCTCCAAAGTTAGAACTTCAAATGGGCCGCAAGTGGGTTGTTGAGAATCAAATTGAGCAGAAAGGCTTGGTCATTGAAGACTGTGATGCAAAGCAGTCTGTATATATTTATGGATGCAAAAACTCTGTCTTGCAGATTCAGGGCAAGGTCAACAATATAACTATTGACAAATGCACAAAGATGGGGGTTGTATTTAAGGATGTTGTTGCAGCTTGTGAGATTGTCAACAGTAATGGGGTTGAGGTTCAATGCCAGGGTTCAGCTCCTACAATTTCGGTGGACAACACTTCTGGCTGCCAGTTATATCTGAGCAAAGACTCATTAGAGACATCCATATCTACTGCAAAGTCAAGTGAGATCAATGTATTGGTTCCTGGTGCTGAGCCTGATGGTGATTGGGTGGAGCATTCTTTGCCACAACAATACATTCATTTGTTCAAGGATGGCCGTTTTGAAACAAATCCAGCTTCTCACTCCGGAGGTTAA 1422 0.4578 MEEKLIQRLESAVSRLEALSAGFHSAASTAGGADAQDAVLDPSVIAFGDLIDQYVGRLSRAAEIIGGQVLEVTKILQAAFAVQKELLSKLKHTQQKPDLAGLAEFLKPLNEVITKATALTEGRRSDFFNHLKAAADSLSALAWIAYTGKDCGMSMPIAHVEESWQMAEFYSNKVLVEYRNKDPNHVEWAKALKELYLPGLRDYVKSFYPLGPVWSPTGKIIAPSKAPASVAPAAPPPPPASLFSSESSQASSSKPKEGMSAVFQQLSSGNVTAGLKKVTADMKTKNRTDKTGVVASGEKESPAASRVSSKAGPPKLELQMGRKWVVENQIEQKGLVIEDCDAKQSVYIYGCKNSVLQIQGKVNNITIDKCTKMGVVFKDVVAACEIVNSNGVEVQCQGSAPTISVDNTSGCQLYLSKDSLETSISTAKSSEINVLVPGAEPDGDWVEHSLPQQYIHLFKDGRFETNPASHSGG. 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03523 473 SUPERFAMILY N-terminal domain of adenylylcyclase associated protein, CAP 44 239 IPR036222 -
Seca4g03523 473 ProSiteProfiles C-CAP/cofactor C-like domain profile. 313 450 IPR017901 -
Seca4g03523 473 FunFam Adenylyl cyclase-associated protein 43 219 - -
Seca4g03523 473 SMART carp 351 388 IPR006599 -
Seca4g03523 473 SMART carp 389 426 IPR006599 -
Seca4g03523 473 MobiDBLite consensus disorder prediction 227 259 - -
Seca4g03523 473 SUPERFAMILY C-terminal domain of adenylylcyclase associated protein 313 472 IPR036223 -
Seca4g03523 473 Pfam Adenylate cyclase associated (CAP) N terminal 3 58 IPR013992 GO:0003779|GO:0007010
Seca4g03523 473 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 2 472 IPR001837 GO:0003779|GO:0007010
Seca4g03523 473 MobiDBLite consensus disorder prediction 280 294 - -
Seca4g03523 473 FunFam Adenylyl cyclase-associated protein 312 472 - -
Seca4g03523 473 MobiDBLite consensus disorder prediction 278 313 - -
Seca4g03523 473 ProSitePatterns CAP protein signature 1. 5 17 IPR018106 -
Seca4g03523 473 Gene3D - 312 472 IPR016098 -
Seca4g03523 473 MobiDBLite consensus disorder prediction 243 259 - -
Seca4g03523 473 Pfam Adenylate cyclase associated (CAP) C terminal 313 470 IPR013912 GO:0003779|GO:0007010
Seca4g03523 473 Gene3D - 43 219 IPR036222 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03523 Seca-Chr4 61175253 61180723 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03523 K17261 - gmx:100793194 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03523 4 61175253 61180723 Seca4g03523 4 61175253 61180723 ECH