Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03521 ATGATTCCCTCCGCCGGCGTTCCCAAGAAGAGGCAGCGGACCGCCCCTACCCGCCATTCCTCCCTTGCCGCCGGCACCACTTCCGACAAAACCCTAACCCAAAATCGCCACCGTGCCTCTCTGAACAGCACCACTGGCGACGGCGACGCCCTCTTCTTCAACGACGCCTGCACCGCCGACGTCGTCCTCCGTCTCTTCACCGACGCCGTCTCGTCGCCGGAATCCTCCCCCTCCGTCGACCCTGCGTCGGTCCCCGATCGCCACGTGTACCTCCACTCGAGCATCCTCCGCCGCTCCAAATACTTCTCCGCCCTCTTATCCGATCGATGGATCGGCCACGTCCACCCTCATCCACCGTCGCCGGAACACTCTCCCTCCTCCTCCGACCACGAATTGTTCCGCCTCAATCTCGGAGTTCCACCCACTCCCGGTTCGATCCAGGCTCATCTCACGGTTCTGGAACTTCTCTACACGAACGATTTCACCAACGCCGTCGACAGCGCATCCACCGCGCTGGATCTGCTCCCTGTCGCGCTGGAATTGCTGTTCGAGGAATGCGTTCGTTGGTGCGTAGGGTTTCTGGAGGCGGTGCCGTGGACGGAGGAGGAAGAGAACAGAGTGGTGAGCCTGATCCCTTTCCTAAGCGAAGAAGAATCGAGGGAGCTCGTAGCTAGGGTTTCCCCTGTCGGTGAAGACGCATGCGAAGCGATGCTGCAAGGGCTGATCTCATCGGCGATGAACAATTACCAGAACACGGCATTCGTGAAAGCCTTTGTTGGGAAGATATTGAGGGATTTGTCATCGAGGGAAACGGCGAAAAGAGTATTGGAAAAAGCGTTCAGGAGAAGCTTGAAGACGGTGAAGGAGTCGTTGGAGGATTATTCGAGCCCTGTGTGCAGAGGGGATCATAATGAAACGGAGGCGATTCAGAGGTTGAATCTGCATAAGGCTTCAACGAATGGGAAACATCTTCTGTGGTTGGTGGAGAGGATGATTGAGCTGAGGGTGGCTGATGTGGCAGTTCGTGAATGGAGTGAGCAAGCACCTTTTACTGCTGATTTGCAGAGGGCTTTCCGTGATGATGCTTGGAGGAATATTGTGCCTGGTTTACCTGCTGTTATTCTGCGCTGCACCTCCAAGCTTGCTCATGCTGTTTGTACCGGCACTATCTTGGCTTCTGCGCAGGTGAGAAGGAAGCTCGTAGAAGGTTGGCTTCCCGTTTTGGTTGTATGCAAAGACAATGTTTCACCAGTATCTCCCAGCAACAAATCGTTATATCTAGAGCTGGAAGAAACATTTTTGCGAATTATCTCCACATTGCCTCTGTCAGATGCTCAAGAATTGTTGCAGAGGTGCCTCAGTTTTTCAACCCGAAACGTTGAAGATTGTCCTCACTTGGTGACAGCATTCAACACCTGGTTCAGGCGTGCTGCCCAACCTCTGTAA 1446 0.545 MIPSAGVPKKRQRTAPTRHSSLAAGTTSDKTLTQNRHRASLNSTTGDGDALFFNDACTADVVLRLFTDAVSSPESSPSVDPASVPDRHVYLHSSILRRSKYFSALLSDRWIGHVHPHPPSPEHSPSSSDHELFRLNLGVPPTPGSIQAHLTVLELLYTNDFTNAVDSASTALDLLPVALELLFEECVRWCVGFLEAVPWTEEEENRVVSLIPFLSEEESRELVARVSPVGEDACEAMLQGLISSAMNNYQNTAFVKAFVGKILRDLSSRETAKRVLEKAFRRSLKTVKESLEDYSSPVCRGDHNETEAIQRLNLHKASTNGKHLLWLVERMIELRVADVAVREWSEQAPFTADLQRAFRDDAWRNIVPGLPAVILRCTSKLAHAVCTGTILASAQVRRKLVEGWLPVLVVCKDNVSPVSPSNKSLYLELEETFLRIISTLPLSDAQELLQRCLSFSTRNVEDCPHLVTAFNTWFRRAAQPL. 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03521 481 Gene3D Potassium Channel Kv1.1; Chain A 43 227 IPR011333 -
Seca4g03521 481 MobiDBLite consensus disorder prediction 17 45 - -
Seca4g03521 481 MobiDBLite consensus disorder prediction 1 45 - -
Seca4g03521 481 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 50 477 IPR038920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03521 Seca-Chr4 61115808 61119681 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03521 - - gmx:100793732 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03521 4 61115808 61119681 Seca4g03521 4 61115808 61119681 ECH