Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03498 ATGAGGGTTTCAGTTTGGCATTTGCAGAGCAGATTTTATTGCACCGCACCGCACCCACCTTCGATATATTCATTCTTACATTGCATAGCCATCTCGCTGGAACATTTTAATTTCCAAGTAATGGCCACAACTAAGATTCTGATCATTGGAGGAACTGGATGGATCGGAAAGTTCATGGTTGAAGCGAGCGCTAAGGCTGGCCACCCCACCTTTGCCCTTGTCAGAGAATCCACTCTTTCCGACCCAGCTAAATCCCCCATCATTCAATCATTCAAGGCCCTCGGTGTCAACTTAGTTTTGGGAGATATACATGACCATGAGAGTCTGGTTAAGGCGATAAAACAGGTGGATGTGGTGATCTCTACTGTGAGTTATATGCACTTACCCGATCAGTTTAAGATTATTTCTGCTATCAAGGAAGCAGGAAATGTTAAGAGGTTTTTTCCTTCAGAGTTTGGAAATGATGTGGATCATGCTAATGGGGTAGATGAGGCAAAGAGTTTAATATTTGACGATAAAGTCCAAATCCGTAGAACCATTGAGACTGAAGGAATTCCCTACACATATGTGGTGGCGAACTTTTTCACTGGACACTTCCTACCCACTTTGTCAGAGCTTAGAGCCACACCTACCCCCTTACATAAAGTTATTATCCTTGGAGATGGAAACCCCAGAGCTGTTTTTAACACGGAAGAGGATGTTGCCACTTACACCATCAAAACTGTTGACGATCCAAGAACGTTGAACAAAACTCTCTACATCAAACCGCTGGCTAACACGTTGTCATGTAATGATCTAGTATCTCTTTGGGAAAAGAAGACTGGTAAAACTCTTGAAAGAGTTTATGTCAAAGAGGATGAACTTTTGAAGCAAATTCAAGAGTCCTCATTTCCCATCAATATGGGCCTTGCTATTTGTCACGCCGCATTTGTGAAGGGAGAGCACACTAACTTCCAAATTGACCCTTCATTTGGAGTAGAAGCTTCCCAGCTTTATCCTCATGTCAAATACACAACCGTGGATGAGTTACTTGACGAAAAATATAATTGCACACCATTTTACTTAAACCAATTTATACCTGTTAACAATGTCTAA 1095 0.4174 MRVSVWHLQSRFYCTAPHPPSIYSFLHCIAISLEHFNFQVMATTKILIIGGTGWIGKFMVEASAKAGHPTFALVRESTLSDPAKSPIIQSFKALGVNLVLGDIHDHESLVKAIKQVDVVISTVSYMHLPDQFKIISAIKEAGNVKRFFPSEFGNDVDHANGVDEAKSLIFDDKVQIRRTIETEGIPYTYVVANFFTGHFLPTLSELRATPTPLHKVIILGDGNPRAVFNTEEDVATYTIKTVDDPRTLNKTLYIKPLANTLSCNDLVSLWEKKTGKTLERVYVKEDELLKQIQESSFPINMGLAICHAAFVKGEHTNFQIDPSFGVEASQLYPHVKYTTVDELLDEKYNCTPFYLNQFIPVNNV. 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03498 364 PANTHER PINORESINOL REDUCTASE-RELATED 41 346 - -
Seca4g03498 364 Pfam NmrA-like family 46 337 IPR008030 -
Seca4g03498 364 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 45 315 IPR036291 -
Seca4g03498 364 CDD PCBER_SDR_a 45 343 IPR045312 GO:0016491
Seca4g03498 364 Gene3D - 194 343 - -
Seca4g03498 364 Gene3D - 45 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03498 Seca-Chr4 60758113 60760117 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03498 K23050 K13266 pvu:PHAVU_011G044500g 464.536