Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03481 ATGGCAGCCTCACCTTTGAACACAAAATCCAATTTCCATGCTCGTTCAAACAGTTTGCCCTCTAGACCTCACCCCATCATTCTGCAATGCAATGAACACTTGGATAGGTTAATTAGATCTTCCCAAGAAACCTCTCCTTCATCATCCTTGCTAAGCCATAAACTAGGAGGCTTGCAAGATCTGCATGAATGTGTTGAAAAATTGGTCGAGCTTCCCCTCACCCAAGAAACCCTTCTCCATGAACCCCAAGAATCATGGGTAGATGGGCTTTTGGATGGATCTTTGAGACTCCTAGATGTGTGCACAGCAGCCAAAGATTCTCTGCTTCATACAAAGGAGTGCATGCGTGAACTTCAATCAATTATGAGAAGAAAAAGGGGTGAAGAAATTGGGATCACAGCAGAGGCTAAGAAGTTCTTGACTTCCAGGAAAGTGGTCAGAAAGGCCATCTTCAAAGCCTTGGGGAATTTGAAGGCTACTACTGCCAAAAATGGAAACTTCTCTTCTAATATCAAAGACCAACAAACCATGGCCTTGGTTAACTTGTTAAAAGATGTTGAAGTAGTCACTCTTTCCATATTTGAGTCATTGTTGAATTTTATCTCTGGATCAACACAACCAAAACCAAGTAGCTGGTCTTTGGTTTCCAAGCTAATCCACACCAAAAGAACAGGCTGCCCACAAGTAACAGATGAAAGTGAATTTTCCCAATTGGATGCAGCATTGCAGTCCTCTGTTCTTCACATGGCATGCAAATCAGACAACAGCAGTAATCTGCAAAACCACTTGGAGAAACTGGAGTCATGCATTCAAGACTTGGAAGAAGGGCTTGAGTTTCTATTTAGACGTTTGATTAAAATCAGAGTTGCCCTTCTTAACATCCTCAATCACTATTTCCATGCTCGTTCAAACAGCTTGCCATCTAGACTTCACCCTCTCTTTCTACAATGCAGTGAACACTTGGACAGGTTAAGAGCTTCCCATTTGCTTACCCATAAATTAAATGGGTTGAGGGATCTACATGATTGTGTTGAAAATTTAATCCAGCTTCCACACACCCAAGAAGCACTTATCCATGAACCCCAAGAATCATGGGTAGATGAGCTTTTGGATGGATCTTTGAGGCTGCTAGATGTGTGTACAACCACCAAAGATTCTCTGCTTCATACAAAGGAGTGTATGAGAGAGCTTCAATCAATTATGAGAAGAAGAAAAGGAGGGGAAGAGGAGCTCAAGGCAGAGGTTAAAAAGTTCTTGACTTCTAGGAAGGTGGTAAGAAAGGCTATCTCAAAAGCCTTAGCAAATTTGAAGGGTACTACTACAAAGTTTTGCAACAACATGACATCTACAAACAAAGATAATCAAACAGTAGCTTTGATTAGCTTATTAGAAAATGTGGAAGTGGTCACCTTATCAACATTTCAGGCACTAATGCAATTTATCTCAGGGACAACACAATCAAAGTCAAGTAGCTGGCTCTTGATTTCAAAGCTAATGCAGACCAAAAAAGTAGCTTGTTCACAATTGGCAGATGAAAGTGAATTTGCCCAACTTGATGAAGCATTGCAATCCTACATGTTTGCTCAACCAAACAAATTTGAAAACATGAATAATCTGCAAAACCACTTGGAGACAATGGAGTTGCTTATTCAAGACCTTGAAGAAGGGCTTGAGTTTCTGTTTAGGCGTTTGATTAAGATTAGAGTTGCTCTTCTTAACATACTCAATCACTAG 1734 0.4054 MAASPLNTKSNFHARSNSLPSRPHPIILQCNEHLDRLIRSSQETSPSSSLLSHKLGGLQDLHECVEKLVELPLTQETLLHEPQESWVDGLLDGSLRLLDVCTAAKDSLLHTKECMRELQSIMRRKRGEEIGITAEAKKFLTSRKVVRKAIFKALGNLKATTAKNGNFSSNIKDQQTMALVNLLKDVEVVTLSIFESLLNFISGSTQPKPSSWSLVSKLIHTKRTGCPQVTDESEFSQLDAALQSSVLHMACKSDNSSNLQNHLEKLESCIQDLEEGLEFLFRRLIKIRVALLNILNHYFHARSNSLPSRLHPLFLQCSEHLDRLRASHLLTHKLNGLRDLHDCVENLIQLPHTQEALIHEPQESWVDELLDGSLRLLDVCTTTKDSLLHTKECMRELQSIMRRRKGGEEELKAEVKKFLTSRKVVRKAISKALANLKGTTTKFCNNMTSTNKDNQTVALISLLENVEVVTLSTFQALMQFISGTTQSKSSSWLLISKLMQTKKVACSQLADESEFAQLDEALQSYMFAQPNKFENMNNLQNHLETMELLIQDLEEGLEFLFRRLIKIRVALLNILNH. 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03481 577 Coils Coil 536 563 - -
Seca4g03481 577 PANTHER OS06G0725500 PROTEIN 9 295 - -
Seca4g03481 577 Pfam Protein BPS1 54 294 IPR004320 GO:0048364|GO:0048367
Seca4g03481 577 Pfam Protein BPS1 333 574 IPR004320 GO:0048364|GO:0048367
Seca4g03481 577 Coils Coil 256 283 - -
Seca4g03481 577 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03481 Seca-Chr4 60573514 60576499 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03481 - - ahf:112771862 528.865