Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03451 ATGAATCGGGAAAAGTTGATGAAGATGGCCGGTTCAGTTCGAACTGGTGGAAAGGGTACTGTGAGAAGAAAGAAGAAGGCCGTCCACAAGACAACAACTACAGATGATAAAAGGCTTCAGAGCACCCTGAAGAGAATAGGGGTGAATGCAATCCCTGCAATTGAGGAGGTCAATATCTTTAAGGATGATGTAGTTATCCAGTTTCTAAACCCCAAAGTTCAAGCATCCATTGCTGCAAATACTTGGGTTGTTAGTGGTTCTCCTCAAACAAAGAAGTTGCAGGATATTCTCCCTAGCATTATCCACCAATTAGGACCAGATAACTTGGAAAACCTGAAGAAATTAGCCGAGCAGTTTCAGAAGCAGGCTCCTGAAGCAGGTGCTGCTTCAACTACAGCACAAGAGGAGAATGACGATGACGTCCCAGAGCTCGTTCCAGGAGAGACTTTTGAGACAGCTGCTGAGGAGACCAAGGCTTAG 480 0.4542 MNREKLMKMAGSVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANTWVVSGSPQTKKLQDILPSIIHQLGPDNLENLKKLAEQFQKQAPEAGAASTTAQEENDDDVPELVPGETFETAAEETKA. 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03451 159 Pfam NAC domain 36 91 IPR002715 -
Seca4g03451 159 Gene3D - 48 104 IPR038187 -
Seca4g03451 159 CDD NAC_BTF3 4 119 - -
Seca4g03451 159 SMART NAC_2 36 91 IPR002715 -
Seca4g03451 159 PANTHER TRANSCRIPTION FACTOR BTF3 FAMILY MEMBER 1 157 IPR039370 -
Seca4g03451 159 MobiDBLite consensus disorder prediction 119 159 - -
Seca4g03451 159 MobiDBLite consensus disorder prediction 1 29 - -
Seca4g03451 159 ProSiteProfiles NAC A/B domain profile. 33 97 IPR002715 -
Seca4g03451 159 FunFam Transcription factor BTF3 homolog 48 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03451 Seca-Chr4 60067323 60068710 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03451 K01527 - gmx:100500153 278.87