Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03380 ATGGATTTGACAAATGATTTGCATATGGACCCTCAGGCAATATCTGTTTTGGAAGGTTCTTTAGCAAGTGCAGAGGAAGTGGATTCATCGCAGAAGCAGAAAAGGGCAAGGAAGAAAAGGGCAAAGAAGAAAAAGAAACAATTTTTACTGGGTGATTCTTCACTGAAGACTGATACTGCTATAAAGGACCCATCACATGAGTCCCTAGCTTTGCCTGATTCCTTGAGTTCCCAAGGAATTGAAGAATGCAATGAAAGGAGGAAAAGGAAGAAGACTGAACATAATGCTGTTGAAAGCAATGCCAATGGTTGTGGCTCTCCAGAGAATATTTTTCCATCAAAAACTTCTATACCTGCTTTGGATATGCCTTCAGATCATCCAATTCAGTGCGTGTCCACCAAGTCAGTGACAAGACAATCTTGTATGGAAGCTGATAATTGTCAGGGAGAAAATGAAGAAAAGGAGCAGCATATGCTCAAAAAGGCTGCAGAAAGCAGCAATGGAGAATGTGACGTCCAAGATGTAAGCTGCAACTGCAATTCAGCTATAGCAAATGGAGAGTTTTCGGCAAAAGAGTCTGTGTTAGAATCTGTAAAAATGAAAATAGAGCATAGTATAAATGATCACAGTCTCAATCCTGAGGAAAAGAGTGGCTTTGTGAAGAATGTAAGTGTGACGACGAAACAGGATGATTACCCAGCAGTTTGTGACTCATCTGATAAAGTCCAGAATGTTAAAACATATACAAGGAGAAAAACATTCAATTTCAATTGTAACAAGGAACCAGCTGTGCAGGACCATCGAAAGGATGATCTACATAAATTTTCTGATGGACCATTCACAGTTGGCTTGATGGAAGGAGAAACAAAATTTTCAGGGGATCAAGTTACCTCACATGGTGGACCTGCAGCTGAGGAAATGAAGTTGATGACAGAGAACACTTCTGGGAAAAGATTAATGACTACATCGTCTGTAGTAGACATTCCTGTGATGCAGCTTGAAGAAACAAATGCTAGACAGCTAGATCATGCTGAGATCACAAGAAATGATCTGTGTTGTCCAGGTGATGTTTCTGATTTAAGCTTAGTCACAGTAAACGGTGGTAATTCAAAGATTTCACAATTCTCACTGGACAGAACTATTATCAGCTACTCAAAGAACAAGCTTCTCATCCTTGATGTGAATGGACTGCTTGCTGATTTTGTCACTGATGTTCCTAGACGATATAAACCAGACCCGGAACCAGATCTTTGGCTTAATAGTAAAAAAGTTTACAAGAGGCCCTTTTGTGATGATTTTCTACAGTTTTGCTTAGACAGATTTCATGTGGGAGTTTGGTCATCTAGAGCCAAGAAAAATGTTGATGGAGTAATCAAATTTCTTATGGGGAAATCTGCATCCAAACTGCTCTTTTGTTGGAATCGGTCCCACTGTACTACAACAGAATTCAGTACTGTTGAGAATAGAGAAAAGCCCCTTGTGTTGAAGGAACTTTGGAAGTTGTGGGAAAAGGTGGAACCTAGTCTTCCATGGGAGAAGGGAGAGTTTAACGAGTCAAACACTCTATTATTGGATGACTCCCCTTACAAGGCACTTATGAATCCTATGCATACAGCAATATTTCCTTATTCTTACCAGTATACTGACACTAAAGACTCATCATTAGGACCTGGAGGTGATCTTCGGGCTTACCTAGAAGGGCTGGCTAAGGCTGAGAATGTTCAAGAGTATGTGTCATTGAATCCATTTGGCCAACGGCCCATAAGAGAAACAAATCCATCTTGGCGTTTCTATCGTAGAGTTATAGAATCAGTTAAACGCAGGCAGCAACATACTAGGCACTCATTACCAGAAAGGGGGCAAACTGCTTACAAAACAAAGCAATGA 1887 0.4038 MDLTNDLHMDPQAISVLEGSLASAEEVDSSQKQKRARKKRAKKKKKQFLLGDSSLKTDTAIKDPSHESLALPDSLSSQGIEECNERRKRKKTEHNAVESNANGCGSPENIFPSKTSIPALDMPSDHPIQCVSTKSVTRQSCMEADNCQGENEEKEQHMLKKAAESSNGECDVQDVSCNCNSAIANGEFSAKESVLESVKMKIEHSINDHSLNPEEKSGFVKNVSVTTKQDDYPAVCDSSDKVQNVKTYTRRKTFNFNCNKEPAVQDHRKDDLHKFSDGPFTVGLMEGETKFSGDQVTSHGGPAAEEMKLMTENTSGKRLMTTSSVVDIPVMQLEETNARQLDHAEITRNDLCCPGDVSDLSLVTVNGGNSKISQFSLDRTIISYSKNKLLILDVNGLLADFVTDVPRRYKPDPEPDLWLNSKKVYKRPFCDDFLQFCLDRFHVGVWSSRAKKNVDGVIKFLMGKSASKLLFCWNRSHCTTTEFSTVENREKPLVLKELWKLWEKVEPSLPWEKGEFNESNTLLLDDSPYKALMNPMHTAIFPYSYQYTDTKDSSLGPGGDLRAYLEGLAKAENVQEYVSLNPFGQRPIRETNPSWRFYRRVIESVKRRQQHTRHSLPERGQTAYKTKQ. 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03380 628 MobiDBLite consensus disorder prediction 22 109 - -
Seca4g03380 628 SUPERFAMILY HAD-like 384 577 IPR036412 -
Seca4g03380 628 Pfam NLI interacting factor-like phosphatase 388 575 IPR004274 -
Seca4g03380 628 ProSiteProfiles FCP1 homology domain profile. 383 568 IPR004274 -
Seca4g03380 628 MobiDBLite consensus disorder prediction 608 628 - -
Seca4g03380 628 PANTHER DULLARD PROTEIN PHOSPHATASE 110 586 - -
Seca4g03380 628 Coils Coil 80 100 - -
Seca4g03380 628 MobiDBLite consensus disorder prediction 80 96 - -
Seca4g03380 628 FunFam Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 352 584 - -
Seca4g03380 628 SMART forpap2 386 550 IPR004274 -
Seca4g03380 628 Gene3D - 364 581 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03380 Seca-Chr4 58711177 58721097 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03380 - - aprc:113864558 761.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03380 4 58711177 58721097 Seca4g03380 4 58711177 58721097 ECH