Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03300 ATGGTTTCTGAGACAAACCAATCCAAGAATGGTTGTGTAATTGGAGCTGGACCATCAGGGCTTGTGGCAGCAAGGGAGTTGAGAAAAGAAGGTCATAAGGTGGTTGTGTTAGAGCAGAATCATGATGTTGGAGGGCAATGGCTTTATGAACCAAATGTAGAAGGGGAGGATCCTTTAGGAAGAAACCCTTTTCTGAAGGTGCATAGCAGTGTTTATGAATCTTTAAGGCTGGCATCTCCACGGGAGATCATGGGGTTCACTGATTTTCCATTTTTGGTCAAGAAAGGTAGAGACATGAGGAGGTTTCCTAGCCATACAGAGCTACTTCAGTATCTAAAGGATTTTTGTGAATATTTTAAGTTGAGAGAGATGATAAAGTTCAACACAAGGGTGGATTATGTGGGAATGTTAGATTATGGTGTTTGTAGTAATGATTTGAAGTGGCTTGTTAGAAGCACAGAGAAGAAGAGTGAGAAGGCTGTGGAAGAGGTGTTTGATGCAGTGGTTGTGGCCACTGGTCATTACTCTAAACCAAGATTGCCCTCCATTAAAGGAATGGATACATGGAAAAGGAAACAAATGCATAGTCACATCTACAGATCCCCTGAACCATTCCGCAATGAGGTTGTGGTGGTGGTTGGAAATTCCTTAAGTGGACAAGATATGTCAATAGAGCTTGTGGAAGTAGCAAAGGAAGTCCATATGAGTTCTAGATCTCTTAAAATCTCTGAGGGTTTATCTAAAGTCATATCCAAACATGAGAACTTTCATCTTCACCCTCAGATAGACTCCCTTCAAGAGGATGGGCAGGTCACTTTCGCGGATGGTTCTTGCATTGTTGCAGACTCTATTTTGTACTGCACAGGGTACTCCTATGCATTCCCCTTTCTTGACACCAAAGGAATGGTGGTTGTAGATGATGACAGAGTGGGGCCTTTGTATGAGCACACTTTCCCCCCATCGCTTGCTCCATCCCTTTCCTTTATAGGCATCCCTAGAAAGGTAAACTACCCTGAAATCAATTCATTTCAGGTCACAACTCTGCAGATCATAGGATTCCCTTTCTTTGAGTCCCAAGCAATATGGATAGCTCAACTGCTTTCCGGGAAAAAAGCATTGCCATCATGGGAGGAAATGATGAAATCCATAAAGGAGTTCTACCATTCAAGAGAAGTAGCAGGCATTCCTAAGCACTGCACCCATGAAATTGCAAACTTTGAGTACTGTGACAAATACGGGGAGAATGTAGGATTCCCACGATTAGAAGAATGGAGAAAAGGGTTGTGCTTATCAGCCCTAATTAACGCTGATGTCAACTTGGAGACATATCGAGATTTGTGGGATGATGATGAGCTGCTCCAAGAGGCCCTTCATAGTCCTCACTTCACTCAACTTGGACTTGAAGATTCTCCTCTGTAA 1419 0.4292 MVSETNQSKNGCVIGAGPSGLVAARELRKEGHKVVVLEQNHDVGGQWLYEPNVEGEDPLGRNPFLKVHSSVYESLRLASPREIMGFTDFPFLVKKGRDMRRFPSHTELLQYLKDFCEYFKLREMIKFNTRVDYVGMLDYGVCSNDLKWLVRSTEKKSEKAVEEVFDAVVVATGHYSKPRLPSIKGMDTWKRKQMHSHIYRSPEPFRNEVVVVVGNSLSGQDMSIELVEVAKEVHMSSRSLKISEGLSKVISKHENFHLHPQIDSLQEDGQVTFADGSCIVADSILYCTGYSYAFPFLDTKGMVVVDDDRVGPLYEHTFPPSLAPSLSFIGIPRKVNYPEINSFQVTTLQIIGFPFFESQAIWIAQLLSGKKALPSWEEMMKSIKEFYHSREVAGIPKHCTHEIANFEYCDKYGENVGFPRLEEWRKGLCLSALINADVNLETYRDLWDDDELLQEALHSPHFTQLGLEDSPL. 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03300 472 PIRSF FMO 7 252 IPR000960 GO:0050660|GO:0050661
Seca4g03300 472 PIRSF FMO 246 418 IPR000960 GO:0050660|GO:0050661
Seca4g03300 472 FunFam Flavin-containing monooxygenase 182 287 - -
Seca4g03300 472 SUPERFAMILY FAD/NAD(P)-binding domain 259 429 IPR036188 -
Seca4g03300 472 SUPERFAMILY FAD/NAD(P)-binding domain 12 248 IPR036188 -
Seca4g03300 472 PANTHER DIMETHYLANILINE MONOOXYGENASE 10 463 - -
Seca4g03300 472 Pfam Flavin-binding monooxygenase-like 257 408 IPR020946 GO:0004499|GO:0050660|GO:0050661
Seca4g03300 472 Pfam Flavin-binding monooxygenase-like 10 239 IPR020946 GO:0004499|GO:0050660|GO:0050661
Seca4g03300 472 Gene3D - 182 287 IPR036188 -
Seca4g03300 472 FunFam Flavin-containing monooxygenase 4 52 - -
Seca4g03300 472 Gene3D - 12 445 IPR036188 -
Seca4g03300 472 PRINTS Flavin-containing monooxygenase (FMO) signature 274 301 IPR000960 GO:0050660|GO:0050661
Seca4g03300 472 PRINTS Flavin-containing monooxygenase (FMO) signature 221 236 IPR000960 GO:0050660|GO:0050661
Seca4g03300 472 PRINTS Flavin-containing monooxygenase (FMO) signature 9 25 IPR000960 GO:0050660|GO:0050661
Seca4g03300 472 PRINTS Flavin-containing monooxygenase (FMO) signature 33 57 IPR000960 GO:0050660|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03300 Seca-Chr4 56836035 56839040 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03300 - - gsj:114416580 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03300 4 56836035 56839040 Seca4g03300 4 56836035 56839040 ECH