Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03296 ATGGAGTGCTCTTGTGGGTTTCCTAGATCACAACCAAGAGATGTTTCTCTTAAGGAACTTAGCAAAAGGTTGGCTGAGTTTGCTGAAATGAGAGGATGGGATCAATATCACAGTCCTAGAAATCTTCTTTTAGCTCTTGTTGGAGAGGTGGGAGAGCTATCTGAGATATTCCAGTGGAAAGGAGAAGTTGCAAAGGGATTACCTGATTGGAGTTGTGATGACAAGAAACACTTAGAGGAGGAACTTTCAGATGTTTTGCTGTATCTAGTGCGTCTTTCTGATGTTTGTGGCCTTGATCTTGGACAAGCTGCTCTTACTAAATTACTCAAAAATGCTGAGAAATACCCTGTTACTAACATCAACACACCCTCTTCAACCACCAATATTCAACTATAA 396 0.4066 MECSCGFPRSQPRDVSLKELSKRLAEFAEMRGWDQYHSPRNLLLALVGEVGELSEIFQWKGEVAKGLPDWSCDDKKHLEEELSDVLLYLVRLSDVCGLDLGQAALTKLLKNAEKYPVTNINTPSSTTNIQL. 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03296 131 Gene3D - 9 121 - -
Seca4g03296 131 SUPERFAMILY all-alpha NTP pyrophosphatases 15 119 - -
Seca4g03296 131 Pfam MazG nucleotide pyrophosphohydrolase domain 38 116 IPR004518 -
Seca4g03296 131 CDD NTP-PPase_RS21-C6_like 22 111 IPR025984 GO:0009143|GO:0047429
Seca4g03296 131 PIRSF UCP029826_pph 8 129 IPR025984 GO:0009143|GO:0047429
Seca4g03296 131 PANTHER - 11 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03296 Seca-Chr4 56774173 56775746 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03296 K16904 - gmx:100527076 209.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03296 4 56774173 56775746 Seca4g03296 4 56774173 56775746 ECH