Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03251 ATGGCTCCCTCGAGGTTTATATTTTGTGTGATGCTCATTTCTATGTTCCTGTTGGTCCTGTCTTCGCTTTTCCTACTCCAGTTTAGCAGTCATTCTTTGATACCTAGATCAGTGTTAGAGCTTATTATTGTCAATAATACATCACTTTACTTCATGCCTAATTTCAAGAGGGAACAAATCATACTTCCTACCTACCCTTCTGAGGATTTAAATTTTCCATCACTAAAACCCATAGAATCAGATGGGCTAGTATCCACTTCAAGCCAGAAAACAAGTTCTGTAGGACAGAAGATGAATGTGGCATCTGACCCAACTCGGGATCTATTGAGAGTATTCATGTATGACTTGCCTCCAGAATTTCACTTTGGGTTATTGGGTTGGAAGGGAAGTGTGAATCAAACATGGCCAGAGGTGGATAACGCCAAACACATCCCACGTTATCCAGGTGGACTGAACTTGCAGCACAGTGTGGAATATTGGCTCACCCTTGATCTTCTGTTATCAAACACTGCAAAAGTTGGCAAACCTTGCACTGCAATTAGGGTGCAGAATTCAAGTCAAGCAGATGTAATTTTTGTGCCATTTTTCTCATCTCTGAGTTACAATCGGTATTCCAAGATTAATGGTGAGGAAAAAATTAGCATTAACAAAATGTTGCAAGACAGATTGGTACATTTCTTAATGGGCCAGAAAGAATGGCAACGTTCAGGAGGGAAGAATCATCTAATTGTAGCCCACCATCCTAACAGCTTGCTGGATGCAAGAAGAAAGTTGGGTTCAGCAATGCTTGTGCTTGCAGATTTTGGTAGGTATCCTGTTGAATTAGCAAATATCAAGAAAGATATAATAGCCCCCTATAGGCATCTTGTAGGCACCATCCCAAGAGCTAAATCAGCTTCATATGAGGAACGTTCCACACTGGTGTATTTCCAGGGGGCAATATACAGAAAAGATGGAGGAGCTATTCGCCAAGAACTGTATTACCTCCTCAAAGATGAGAAAGATGTGCATTTCACTTTCGGGAGCATAGGTGGAAATGGAATTAATCAGGCAAGCCATGGCATGGCCATGTCCAAATTCTGCCTGAACATTGCTGGAGATACCCCATCCTCCAATCGCCTCTTCGATGCCATAGTAAGCCACTGTGTTCCTGTGATCGTCAGTGATGAAATTGAGCTACCATTTGAAGATGTCTTGGACTACTCAGAATTTTCCTTATTCGTCCGTGCTGTGGATGCCATAAAGAAAGGCTACCTGCTGAATCTCCTTCATTCAATCAAGCGAGAGGAGTGGACCAAGATGTGGGAAAGGTTGAAGGAGATCACACATCACTTTGAGTATCAATATCCATCCCAGCCTGGGGATGCAGTGAACATGATTTGGCAGGAAGTTGCACGTAAGGTATCTTCAGTGCAGTTCAATTCACACAGGAAGAACAGATACCAGAGATCCCAGCTTCATCTTAATACTAACTGA 1476 0.4241 MAPSRFIFCVMLISMFLLVLSSLFLLQFSSHSLIPRSVLELIIVNNTSLYFMPNFKREQIILPTYPSEDLNFPSLKPIESDGLVSTSSQKTSSVGQKMNVASDPTRDLLRVFMYDLPPEFHFGLLGWKGSVNQTWPEVDNAKHIPRYPGGLNLQHSVEYWLTLDLLLSNTAKVGKPCTAIRVQNSSQADVIFVPFFSSLSYNRYSKINGEEKISINKMLQDRLVHFLMGQKEWQRSGGKNHLIVAHHPNSLLDARRKLGSAMLVLADFGRYPVELANIKKDIIAPYRHLVGTIPRAKSASYEERSTLVYFQGAIYRKDGGAIRQELYYLLKDEKDVHFTFGSIGGNGINQASHGMAMSKFCLNIAGDTPSSNRLFDAIVSHCVPVIVSDEIELPFEDVLDYSEFSLFVRAVDAIKKGYLLNLLHSIKREEWTKMWERLKEITHHFEYQYPSQPGDAVNMIWQEVARKVSSVQFNSHRKNRYQRSQLHLNTN. 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03251 491 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 20 462 IPR004263 GO:0006486|GO:0016757
Seca4g03251 491 Pfam Exostosin family 108 420 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03251 Seca-Chr4 56116322 56118892 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03251 - - gmx:100795371 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03251 4 56116322 56118892 Seca4g03251 4 56116322 56118892 ECH