Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03239 ATGGTGGCCGACAAGTCCAAGAAGTTGAAAGTTTCGGACAAGGGCGAGAATCCTGAGGAAATCGATGGAGAACTCGTCCTCTCCATCGAGAAGTTGCAGGAGATCCAAGACGAGCTCGAAAAGATCAACGAGGAGGCCAGCGATAAAGTCCTCGAAATTGAGCAGAAGTACAATGAGATACGGAAACCGGTGTATGATAAGCGGAACGAGATTATTAAGTCTATTCCTGATTTTTGGTTGACTGCTTTTTTGAGCCATCCTGCTCTTGGTGATCTTTTGAACGAGGAAGATCAGAAGATATTTAAGTATTTGAGTTCTCTTGAGGTTGAAGATTATAAAGATGTTAAATCAGGCTACTCAATCACCTTTAATTTCAATCCCAATCCCTATTTTGAGGATACAAAGCTTATAAAGACTTTTACCTTCCTTGAAGAAGGAACAACAAAGGTTACTGCTACACCCATAAAATGGAAAGAGGGGAAGGGCATACCCAATGGAGTGAATCACGAGAAGAAGGGGAACAAGCGAGCTCCTAATGATGTCAGTTTCTTTAGTTGGTTTACTGACACTGAGCAGAAAGATGATATGGATGACATCCATGATGAGGTTGCAGAATTAATCAAGGATGATTTATGGCCAAATCCGCTTACTTATTTCAACAATGAGGAGCCTGATGAAGAGGATGGTGATGAAGATGAAGCTGATGATGAGGTAATTGAAGTTCCATTTTGTCTTTTCAGACAGCTTAGGTGA 753 0.4117 MVADKSKKLKVSDKGENPEEIDGELVLSIEKLQEIQDELEKINEEASDKVLEIEQKYNEIRKPVYDKRNEIIKSIPDFWLTAFLSHPALGDLLNEEDQKIFKYLSSLEVEDYKDVKSGYSITFNFNPNPYFEDTKLIKTFTFLEEGTTKVTATPIKWKEGKGIPNGVNHEKKGNKRAPNDVSFFSWFTDTEQKDDMDDIHDEVAELIKDDLWPNPLTYFNNEEPDEEDGDEDEADDEVIEVPFCLFRQLR. 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03239 250 Pfam Nucleosome assembly protein (NAP) 73 221 IPR002164 GO:0005634|GO:0006334
Seca4g03239 250 Pfam Nucleosome assembly protein (NAP) 29 73 IPR002164 GO:0005634|GO:0006334
Seca4g03239 250 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 16 233 IPR002164 GO:0005634|GO:0006334
Seca4g03239 250 SUPERFAMILY NAP-like 7 220 IPR037231 -
Seca4g03239 250 MobiDBLite consensus disorder prediction 221 236 - -
Seca4g03239 250 Gene3D - 1 75 - -
Seca4g03239 250 MobiDBLite consensus disorder prediction 215 236 - -
Seca4g03239 250 Coils Coil 25 59 - -
Seca4g03239 250 Gene3D Nucleosome assembly protein 76 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03239 Seca-Chr4 55699808 55704281 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03239 K11290 - gmx:100808081 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03239 4 55699808 55704281 Seca4g03239 4 55699808 55704281 ECH