Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03162 ATGTGTCCGAAACTGCAGTGTCTTAGAAAAAAGAGAAGCACACAAAACAGGGCTAGAGGGTTGCTTGGAGACAACATAGGATTGAAAGAAAACCTTATCAAGAAGGCATGTGCTTTGGCCTTTAAAGCTCACAAGTCACCCAAACAGCACTACCTTTGTGAAAAGTTTTGGACTTCTTCAGAAGCTTATCTTGTTTTCAGCTTTCCAGGATCATGGATTGACACTGATTGGTTTGTTCCAAATCACAAACCTTTTGGGGAAAGAAAGATATATCCTGATCTCTACCCTTCACTTAGAAGCATTGGTAATGATGAAGCTGCTTTGGTGAACGAAGCCTTTTTAGAGAGATTCTGTAGCATTTTGAAAAATTCCTCAATTAGATCCAAGGTGAAGAAAGCTTTGGTGGATGGGAAGCAAATAGTGTTCACAGGGCACTCCTCTGGGGCTGCAGTTGCCATTCTTGCAACATTCTGGGTTTTGGAAGAGTTTTTCAATCCAACAAAAAACCAAAAGCATAAGCCTCCCCTGTGTGTCACTTTTGGGTCCCCCTTAGTTGGTAATCATATATTCTCTCATGCTTCAAGGAGAGAAAATTGGTCATGCTACTTCATCCACTTTGTGATGAGATTTGACATAGTACCACTCATTTTGCTTGCTCCCTTCTCTTCTATTAAGCAAACTTTTAGCTCTATTCTCCAATTTTTGACTCCTGAGTCCAAACCTTCCACCCAAGAATCACTGCAAAGGGCCAATATGACTTCTGAATTTTACTCAACTGTGATGAGGAATGCAAAAACTGTTACACACCATGCTGCCTGTAATCTCATGGGCAACACAAATTCATTGTTGGAGACAATAATGAATTTTGTTGACTTAAGCCCTTATAGACCTTTTGGTACCTACATCTTTTGCGGTGGCAATGGACAATTGATTGTGATAAAAGACTCAAATGCCGCTTTGCAACTCATGTTCCACACTGCTCAGCTAGATTTGGCAGAACCTTATGAAGCTGCCAACAAAAGCATATCACAACATCATGCTTATAAAGATGCATTAGAAGATAGCTTGCAAAGGCAGAATGTGGCATACATGGACAAACTTGATGAGCTTCCCTTGTCCACCCATGGTGACATTGCAGCAGTTAGTGTGGCTTTGGATGGCCTTGGACTGGTAAGCACAGAAGCAAGGTTATGCCTTCGAGCAGCTGGTGTGTTGGAAAGGCAAAAAGAGATAAATGAGAAGGAAATAGAAAAGGCGTTTGAGGAGAAAGCCTTGTCAAGCATGGAGAAGCTTGAAGAATACAAAAGAAAATGTGAGATAGTAAAGAGCAAGGGTTATTATGATTCTTTCAAGGTGCAAAAGGAGACCATAGACTTCGAAGCAAATGTGGAGAGGCTTGTGCTGGCTGGAGTATGGGATATGATCATTGAAAAGCAAAGAAGTGATGAACTCCCAGATGAATTTGAAGGCAAGAAAGAATGGGTTGAGTGTGGAAAATGGTTTCGTCGACTAGTGGAGCCATTGGATATTGCCAATTATTACCGCCATGGGAAGGATAAAGAGAGTGGTCCTTACATGGAGAAGGGAAGGCCAAAACGATATAGGTATACACAAAGATGGTTGGAGCATTCACAAAGAAAGTCACAAGAAGCTAATTACTACTCAGAATCTTGCTTCTGGGCTGAGGTGGAGGATCTTGCAAGTAACAACAATAGCTCTTTTGAAAGGGTTAAGCTACTAGAGGATCAAATAAGAAGGTGGAGTGAAATGGGTGAAGTTGGTAAAGATGTCTTCCTGAAGGATTCTACCTTGGTGAAGTGGTGGAAAGCTCTGCCTCCACAACACAAGCAAGAATCATGTATTAGAAGTCTGATCGAAGCGTGA 1884 0.4151 MCPKLQCLRKKRSTQNRARGLLGDNIGLKENLIKKACALAFKAHKSPKQHYLCEKFWTSSEAYLVFSFPGSWIDTDWFVPNHKPFGERKIYPDLYPSLRSIGNDEAALVNEAFLERFCSILKNSSIRSKVKKALVDGKQIVFTGHSSGAAVAILATFWVLEEFFNPTKNQKHKPPLCVTFGSPLVGNHIFSHASRRENWSCYFIHFVMRFDIVPLILLAPFSSIKQTFSSILQFLTPESKPSTQESLQRANMTSEFYSTVMRNAKTVTHHAACNLMGNTNSLLETIMNFVDLSPYRPFGTYIFCGGNGQLIVIKDSNAALQLMFHTAQLDLAEPYEAANKSISQHHAYKDALEDSLQRQNVAYMDKLDELPLSTHGDIAAVSVALDGLGLVSTEARLCLRAAGVLERQKEINEKEIEKAFEEKALSSMEKLEEYKRKCEIVKSKGYYDSFKVQKETIDFEANVERLVLAGVWDMIIEKQRSDELPDEFEGKKEWVECGKWFRRLVEPLDIANYYRHGKDKESGPYMEKGRPKRYRYTQRWLEHSQRKSQEANYYSESCFWAEVEDLASNNNSSFERVKLLEDQIRRWSEMGEVGKDVFLKDSTLVKWWKALPPQHKQESCIRSLIEA. 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03162 627 Gene3D alpha/beta hydrolase 22 358 IPR029058 -
Seca4g03162 627 Pfam Enhanced disease susceptibility 1 protein EP domain 430 622 IPR041266 -
Seca4g03162 627 SUPERFAMILY alpha/beta-Hydrolases 59 221 IPR029058 -
Seca4g03162 627 Pfam Lipase (class 3) 105 216 IPR002921 GO:0006629
Seca4g03162 627 Coils Coil 402 431 - -
Seca4g03162 627 PANTHER PROTEIN EDS1-RELATED 23 626 IPR044214 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03162 Seca-Chr4 54105970 54108913 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03162 95 230 Acyl Lipid Metabolism Gene Families AT5G14930 28.676 2.12e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03162 K18875 - gmx:100820237 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03162 4 54105970 54108913 Seca4g03162 4 54105970 54108913 ECH