Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03147 ATGCTTACAGATGCCCATAAAAAATACGGTGCGATGGGAACAATACTAGTTGTGAAGGTTTCTCCAGAGTCAGCCAGCCAGTTTGGGGAATTGGTAGCTGATCCAGTCACCAATGAACTCTTGCACTACACAGAGAAACCTGAAACTTTTGTAAGTGATCGGATAAACTGTGGTGTGTATATATTTACACCACACATCTTTACTGCTATCGAGGGTGTTTCTACTCAGCGGAAAGACAGAGCTAATCTAAGACGAGTCTCCAGCTTTGAAGCAATGCAGCTAGACACAAGGAGTCGCCCTCCCAATTATGTCAGACTGGATCAAGATATCCTCTCACCCCTTGCAGGGAAGAAACAGTTGTATATATATGAAACCATGGACTTTTGGGAACAAATTAAAACTCCTGGAATGTCCATAAAATGTTCAGCCTTGTATCTTTCCCAATTTCGTTACACAGCCCCCCACCTATTAGCAAATGGAGATGGTACTAAGAAAGCCTGCATCGTTGGTGATGTTTATATTCATCCATCAGCAAAAGTGCATCCATCTGCAAAGATTGGACCTAGTGTATCAATATCTGCAAATGCTCGTATAGGAGCTGGTGCAAGGCTCATCAGTTGTATCGTCCTTGATGATGTTGAAATCAAGGAGAATGCTGTTGTTCTTCATGCAATTGTTGGATGGAAATCCTCTATTGGAAGATGGGCCCGTGTCCAGGCAAGTTTAGAAATTTTAATATTAAATTATATTGGTCTGCTAACTAAAGGCATGTGTTGTATTTCTGTTACTCGAGTTCTCAATATTGCTTAG 810 0.4136 MLTDAHKKYGAMGTILVVKVSPESASQFGELVADPVTNELLHYTEKPETFVSDRINCGVYIFTPHIFTAIEGVSTQRKDRANLRRVSSFEAMQLDTRSRPPNYVRLDQDILSPLAGKKQLYIYETMDFWEQIKTPGMSIKCSALYLSQFRYTAPHLLANGDGTKKACIVGDVYIHPSAKVHPSAKIGPSVSISANARIGAGARLISCIVLDDVEIKENAVVLHAIVGWKSSIGRWARVQASLEILILNYIGLLTKGMCCISVTRVLNIA. 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03147 269 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 148 IPR029044 -
Seca4g03147 269 Pfam Nucleotidyl transferase 4 82 IPR005835 GO:0009058
Seca4g03147 269 Gene3D Hexapeptide repeat proteins 157 260 - -
Seca4g03147 269 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 3 247 - -
Seca4g03147 269 SUPERFAMILY Nucleotide-diphospho-sugar transferases 2 228 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03147 Seca-Chr4 53966746 53972755 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03147 K00966 - gmx:100780801 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03147 4 53966746 53972755 Seca4g03147 4 53966746 53972755 ECH