Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03140 ATGCAGAGTGGTGATAATGATGCTGTTTGGCTGATGCAGGGATGGCTATTTTCATATGATCCATTCTGGAGACCTCCTCAAATGAAGGCCCTTTTACATTCTGTTCCTGTTGGAAAGCTGGTGGTTCTTGACCTGTTTGCCGAAGTAAAACCCATATGGATTACCTCAGAGCAGTTTTATGGAGTTCCCTACATCTGGTGTATGCTGCACAATTTTGCAGGAAACATTGAGATGTATGGGATATTAGATGCAATAGCATCCGGGCCAATTGAAGCACGTACAAGTGTTAACTCAACAATGGTTGGAATTGGAATGTCTATGGAAGGTATAGAACAAAATCCCATTGTCTATGATCTGATGTCTGAAATGGCATTTCAGCACAAGAAAATTGATGTTAAGGAGTGGGTTAATCTGTATTCAACTAGACGATATGGAAGACCAGTTCCTTTAATACAAGAGGGATGGAATGTCTTGTATCACACCATTTACAATTGCACTGATGGAGCGTACGACAAAAACAGAGATGTCATTGTAGCATTCCCAGATGTTGACCCTTCCTTAATTTCAGTACAACACGAATGGTCTTACAACTATGGCAAGCCATACTCAAGAACAATTATCAAGGAAATAACTGATACCTTTGATCGACCTCATCTATGGTATTCAACTTCTGAAGTAATTTATGCATTGGAGCTATTTATAGCCAGTGGATATGAAATTTCAACAAGTAATACTTATAGGTATGATCTTGTTGATCTCACTAGACAAGTCTTAGCAAAATATGCAAATCAGTTGTTCTTTAAGGCCATAGAGGCATACCTATCACATGATGTCCATGGAGTGACACTCCTCAGCCAGAGATTTCTGGACCTAGTAGAAGATTTAGATGCCCTGTTGGCTTGCCATGATGGATTTCTTCTGGGACCTTGGTTAGAAAGTGCAAAGCAACTAGCTCAAAATGAAGAACAGGAGAGACAGTTTGAGTGGAATGCTAGAACACAAATTACCATGTGGTTTGACAACACAGAAGAGGAAGCCAGTCTGCTTCGTGACTATGGAAACAAGTACTGGAGTGGGCTTCTGCGTGATTACTATGGCCCCAGAGCTGCTATTTATTTTAAATATTTAAGAGAAAGCTTAGAGAAAAGCGAGGATTTCAACTTAAAGAAATGGAGGAAGGAGTGGATAAAGCTAACCAATGATTGGCAGAGCCGTAGGAATACATTTACAGCGGAAAGTAGAGGAGATGCTCTGAACACTTCTCGGTGGCTCTTCAACAAATACCTGAACCTGAGCAATCCTGAGACGAAGCTCAGACTGGAGAACTGGGCTGAACGCAAATCAATGAAATCTCAATGA 1359 0.4077 MQSGDNDAVWLMQGWLFSYDPFWRPPQMKALLHSVPVGKLVVLDLFAEVKPIWITSEQFYGVPYIWCMLHNFAGNIEMYGILDAIASGPIEARTSVNSTMVGIGMSMEGIEQNPIVYDLMSEMAFQHKKIDVKEWVNLYSTRRYGRPVPLIQEGWNVLYHTIYNCTDGAYDKNRDVIVAFPDVDPSLISVQHEWSYNYGKPYSRTIIKEITDTFDRPHLWYSTSEVIYALELFIASGYEISTSNTYRYDLVDLTRQVLAKYANQLFFKAIEAYLSHDVHGVTLLSQRFLDLVEDLDALLACHDGFLLGPWLESAKQLAQNEEQERQFEWNARTQITMWFDNTEEEASLLRDYGNKYWSGLLRDYYGPRAAIYFKYLRESLEKSEDFNLKKWRKEWIKLTNDWQSRRNTFTAESRGDALNTSRWLFNKYLNLSNPETKLRLENWAERKSMKSQ. 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03140 452 Pfam Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain 135 427 IPR024732 -
Seca4g03140 452 Gene3D Glycosidases 1 127 - -
Seca4g03140 452 PANTHER ALPHA-N-ACETYLGLUCOSAMINIDASE 1 429 IPR007781 -
Seca4g03140 452 Pfam Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain 1 126 IPR024733 -
Seca4g03140 452 Gene3D - 129 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03140 Seca-Chr4 53882380 53887645 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03140 K01205 - gmx:100791160 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03140 4 53882380 53887645 Seca4g03140 4 53882380 53887645 ECH