Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03116 ATGAAAGAAATATTGGAGATGCTTGCTGTGAAACCAAACTCAAAGAATGCTGAGATTGTGGAGAAAACCATTGGTCGTTGTGAAGCACCTCCAATGGATGGAGAGGAAAAATATTGTGCAACTTCATTAGAATCCATGGTTGATTTTATCACTTCCAAGCTTGGGAAGAATGTACGTACTATCTCTACAGAGGTGGAAAGGGAAACTAAATTACAAATTTTTTTGGTGAAAGATGGAATGAAGAAGTTAGCAGATGATAACATGGTTGCTTGTCATCCTATGAGTTATCCATATGTTGTCTTTTGGTGTCATGAATTATCAGAGACTGTTGCATATTTTATGCCTTTGGAAGGAGAAGATGGGGCTAGAGTCAAAGCAATTGCTGTATGCCACAAAGACACTTCAAAATGGGATCCAAATCATTTAGCATTCCAAGTGCTCAAAGTAAAGCCTGGAACTGTTCCAGTGTGTCATTTCTTCCCTGAGGGCCATCTTCTTTGGCTTGCTAAGTAA 513 0.3899 MKEILEMLAVKPNSKNAEIVEKTIGRCEAPPMDGEEKYCATSLESMVDFITSKLGKNVRTISTEVERETKLQIFLVKDGMKKLADDNMVACHPMSYPYVVFWCHELSETVAYFMPLEGEDGARVKAIAVCHKDTSKWDPNHLAFQVLKVKPGTVPVCHFFPEGHLLWLAK. 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03116 170 ProSiteProfiles BURP domain profile. 1 170 IPR004873 -
Seca4g03116 170 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 2 169 IPR044816 -
Seca4g03116 170 SMART BURP_2 2 170 IPR004873 -
Seca4g03116 170 Pfam BURP domain 1 168 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03116 Seca-Chr4 53440098 53440610 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03116 - - lja:Lj1g3v1989440.1 292.737