Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03082 ATGCTTCTTTTACTAAATGGCAGCAACAACCCGGATCTGTTCAAGTGTCTTGCTGAGGAACAACATCCTAAGTTTCTGGTATTTGCTTGCTCTGACTCTCGAGTGAGTCCCTCTGTTATTCTAAACTTCCAACCTGGAGAAGCTTTTATGATTCGCAACATTGCTAACATGGTCCCTCCATTTAATCAGCAAAGGTACAGTGGAGTTGGTGCAGTTATTGAGTATGCTATCACGGCTCTTGAGGTGGAAAATATTCTAGTCATTGGACATAGCCGCTGTGGTGGAATAAAAAGGCTTATGAGTCATCCAGAGGATGGTTCTGCTCCCTATGACTTCATAGATGATTGGATGAAAATTGGTTTACCTGCCAAAGCGAAAGTCCTGAGGGAACATGAAGGCAGTGATCTCAAAGAACTATGCAAATTCTGTGAAAAGGAGTCGGTGAATAACTCGTTGGTGAACCTGCTGACATATCCATATGTTGATAGAGAAATAAGGAGCAAGAAATTGGAGCTGTTGGGGGGTTACTATGATTTTGTGGTGGGAGAATTCAAGCTATGGAAGTATAATTCTCACTTCACTAAACCCATTACCATTCCTCTCCAAGACCCATGCCATGACTTGATTGTGTAA 633 0.4218 MLLLLNGSNNPDLFKCLAEEQHPKFLVFACSDSRVSPSVILNFQPGEAFMIRNIANMVPPFNQQRYSGVGAVIEYAITALEVENILVIGHSRCGGIKRLMSHPEDGSAPYDFIDDWMKIGLPAKAKVLREHEGSDLKELCKFCEKESVNNSLVNLLTYPYVDREIRSKKLELLGGYYDFVVGEFKLWKYNSHFTKPITIPLQDPCHDLIV. 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03082 210 PANTHER CARBONIC ANHYDRASE 9 191 IPR001765 GO:0004089|GO:0008270
Seca4g03082 210 FunFam Carbonic anhydrase 6 196 - -
Seca4g03082 210 Pfam Carbonic anhydrase 26 183 IPR001765 GO:0004089|GO:0008270
Seca4g03082 210 SMART Pro_CA_2 18 188 IPR001765 GO:0004089|GO:0008270
Seca4g03082 210 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 74 94 IPR015892 GO:0004089|GO:0008270|GO:0015976
Seca4g03082 210 SUPERFAMILY beta-carbonic anhydrase, cab 9 196 IPR036874 GO:0004089|GO:0008270
Seca4g03082 210 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 30 37 IPR015892 GO:0004089|GO:0008270|GO:0015976
Seca4g03082 210 Gene3D Carbonic anhydrase 6 199 IPR036874 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03082 Seca-Chr4 52918536 52921435 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03082 K01673 - gmx:547671 323.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03082 4 52918536 52921435 Seca4g03082 4 52918536 52921435 ECH