Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03050 ATGATGAATGGGCGAGGCGAAGTCGGGTCTCCGGATCCGTTGGATTCGTTCCCTCGGTTGCGGGTTCGCGAATCGGACGATGCTTCTCGCCGCTCTTCCTTCGGCGGCGACGACTCCGAGTTGGAACGGTACTGCAGCGCCAACTCGGTGATGGGAACCCCTAGCACCGCTATGAGCATGTGCAGCGCCATCACCGTTTTCCACGATTTCTCCGATTGCGATTTCGGTTTCGCCAGCGGCTTCGACGATGGCAATAACAACAGCTTGGTGAGTTTCAGAGGAGGAACGGCAGAGACAAATCGCAACGACAGGAAGAAGCTCGGAACGCAGCGGAACTTGAGGTACGGTTCCAGTGGATTGGAATTGTACGGTGACGGCGGTGACGAGCTTGCTATTACCGCGCTTGATTCGTCGGAGTTGATAGGATTTAACCGAATTGAAGAGCCTCATGGGAATGGGAATGAAAGTGAAGTTGGGGAACGAGAGATGGAGAGGGAAGAAGAAGATGAGGATTTCTCAGAGGGTGAGGAATCGATGTACAACTATGGCAGTGACGGTGACAATGGGAATGAGTTCTATTTGTCGAAGGGTGAGAATGGGAATGAGAGCTATTTGTTAAAAGGTGACAATGGGAATGAGTTCTATTTGTCGAGGAGTATGCGTTATCATGAGGAGCCTGAAGTGCGAAACGAGAATCCCTTGTTTATGAACGCTTCTGTGGCCTTTGGTTCACACGACTTGGATGATTTTTTGCTGCAAAATGGTCCAGTTTCTGCCATGTCTGATCTATTTTGCAACCAGCAAAAAAATAAGAATCATGTTGAAGGGGATCCAGTGACTTTTGGTGGAAAAGAGGAAGGAATTGATGAGAAGGATGTGGTTACAGTCAATGAAGAAGTTGAAGAAACAAAAGATATTGGTGACCCAGAAGCTATAGAAGAGGTCAAGGACATGGACAGGGACAGGGAAAGGGACAAAGACGTTCCTGTTGATGGTTGTCAAGTTCAAGGAGTTGACAAATTAGTTAGTTTTGGGCTGTGCATGGATAATGTTAGTTGTCCTGAAACATTTTCTATCTCAAAGGTCAGTGAAGAAGATTTGGATCTGCCACCAGAAGAAGCTCCTCTGAAGAGTTTGAATACTGATGGTGGAAGCGAGGAAAAGGGAAATCCATGTATCAATAGTGATGAAGCTATTGCCACTAGTGATGCTCAATGTGTAAACCCAGAGCTGGATAATTCTAAGTTTAACTTTGATCACTTTTGTGATAGTAGAGTAGATCAAACTTCTTCCAATCCATCCATCCATGTAGGGAATATAGATGCAAAATCATTTGAGAGCCTTGAACAAATTATGCCGCCTTCAAATAGTGGAATGAGGAAAACACTAGAGAGCTCTTCCACCTCAACAAATGTCTTGGAAAAAAGTCCTGTGGTATCTATGATAGAGGACTTTGAGCTAAATGAATTCTATGACGAGGTTGTTCAGGAGATGGAAGAAATTTTACTGGATTCTGTGGATTCTCCTGGGGCTAGACTTTCCATGAATAACAGAGTGCTTGAACCGCAATTGTCTATGCCTTTAAGAGATGGTGGGTTGACAGCTTCTACTTCTAGTTCACATGATGCTTACCTCCTAGTTCAGCGCCCAAAAAGAATAAATAGGATTGAAGTGATAGGTGCAAGGCAGAAGAAAGGGGATGTTTCTTTCAGTGAAAGATTGGTTGGGGTGAAGGAATACACTGTTTATAGAATAAAGGTGTGGAGTGGCAAGGATCAGTGGGAGGTTGAAAGGCGATATCGCGATTTCCTAACTCTCTATCGTTGCATGAAAACTTTATTCAATGAGCAAGGCTGGATTTTACCCTTGCCTTGGTCTTCTGTTGAAAGGGAATCCAAGATATTTAGAAGTGCATCTCCTGATATTATTGTGAACAGAAGTGTTCTCATTCAAGAGTGTTTACAGTCTATTCTATCTACCAGGTTCTTTTCAAGTCCTCCAAGAGCATTGGTTTGGTTTTTGTCCCCTCAAGATTCACATCCTATTTCACCCGTGTCAAGTGCACCAGTGTCTCACTCTTCTTTTACAAGAGGGGAAAACAATCGAAACTTTTCCACTTTAGGGAAGACCATATCTCTTATAGTTGAAATTCCATCTAATAAATCTATGAGGCAGTTGTTAGAAGCACAACATCATACCTGTGCTGGATGCCGTAAGCATTTTGATGATGGAAAAACTTTGATTTGGGATTTTGTACAGACATTTGGATGGGGGAAGCCTCGACTTTGTGAATACACTGGTCAACTATTCTGCTCTTCTTGCCATACAAATGAGACTGCAGTCTTGCCAGCAAGGGTTTTACATCATTGGGATTTCACTCCTTATCCTGTTTCTCAGATGGCAAAGTCATATCTGGATTCTATACATGAACAGCCCATGCTTTGTGTCACTGCTGTTAATCCCTTCCTTTTGTCAAAGGTCCCAGCCTTGCTTCATGTTATGAGCGTAAGAAAAAAGATAGGAACTATGCTTCCATATCTTCGCTGCCCATTCCGGAGGTCTGTCAACAGAGGACTTGGAAGCCGGAGATATCTTCTTGAAAGCAATGACTTCTTTGCTCTTAGAGATTTGATTGATCTTTCCAAAGGAGTCTTTGCTGCACTTCCTGTGATGGTGGAAACTGTGTCAAGGAAAATCCTGGAACACATTACTGACCAATGCCTCATATGCTGTGATGTGGGAGTCCCCTGCAGTGCCCGACAAGACTGCAGTGACCCATCTTCGCTCATTTTCCCATTTCAGGAAGACGATATTGAAAGGTGCAAAGCTTGTCATTTGGTTTTCCATAAGCGTTGCTTTACAAAGCTTGCAAATTGTCCTTGTGGGGCACAACTCAGATTGAATGAGACAAGGAGCTTAACTAAAGCAAGCCAAAAAGGTGGTGGTAAAACAAGAGGAGCTTTGGACTTGTTAGGCAGGGGACTGAGTTCTGGGATGTCACCCAGGTTCCTATCTGGATTCTTTACGAAGGAAAAGCCTGAGAGGAATAGGGAGAATAAAGGTGAAAATATCATCTTAATGGGTTCCTTACCAAGCACTTCTTTATGA 3108 0.4385 MMNGRGEVGSPDPLDSFPRLRVRESDDASRRSSFGGDDSELERYCSANSVMGTPSTAMSMCSAITVFHDFSDCDFGFASGFDDGNNNSLVSFRGGTAETNRNDRKKLGTQRNLRYGSSGLELYGDGGDELAITALDSSELIGFNRIEEPHGNGNESEVGEREMEREEEDEDFSEGEESMYNYGSDGDNGNEFYLSKGENGNESYLLKGDNGNEFYLSRSMRYHEEPEVRNENPLFMNASVAFGSHDLDDFLLQNGPVSAMSDLFCNQQKNKNHVEGDPVTFGGKEEGIDEKDVVTVNEEVEETKDIGDPEAIEEVKDMDRDRERDKDVPVDGCQVQGVDKLVSFGLCMDNVSCPETFSISKVSEEDLDLPPEEAPLKSLNTDGGSEEKGNPCINSDEAIATSDAQCVNPELDNSKFNFDHFCDSRVDQTSSNPSIHVGNIDAKSFESLEQIMPPSNSGMRKTLESSSTSTNVLEKSPVVSMIEDFELNEFYDEVVQEMEEILLDSVDSPGARLSMNNRVLEPQLSMPLRDGGLTASTSSSHDAYLLVQRPKRINRIEVIGARQKKGDVSFSERLVGVKEYTVYRIKVWSGKDQWEVERRYRDFLTLYRCMKTLFNEQGWILPLPWSSVERESKIFRSASPDIIVNRSVLIQECLQSILSTRFFSSPPRALVWFLSPQDSHPISPVSSAPVSHSSFTRGENNRNFSTLGKTISLIVEIPSNKSMRQLLEAQHHTCAGCRKHFDDGKTLIWDFVQTFGWGKPRLCEYTGQLFCSSCHTNETAVLPARVLHHWDFTPYPVSQMAKSYLDSIHEQPMLCVTAVNPFLLSKVPALLHVMSVRKKIGTMLPYLRCPFRRSVNRGLGSRRYLLESNDFFALRDLIDLSKGVFAALPVMVETVSRKILEHITDQCLICCDVGVPCSARQDCSDPSSLIFPFQEDDIERCKACHLVFHKRCFTKLANCPCGAQLRLNETRSLTKASQKGGGKTRGALDLLGRGLSSGMSPRFLSGFFTKEKPERNRENKGENIILMGSLPSTSL. 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03050 1035 MobiDBLite consensus disorder prediction 1 37 - -
Seca4g03050 1035 Pfam PX domain 588 675 IPR001683 GO:0035091
Seca4g03050 1035 Gene3D - 563 681 IPR036871 GO:0035091
Seca4g03050 1035 SUPERFAMILY PX domain 573 679 IPR036871 GO:0035091
Seca4g03050 1035 MobiDBLite consensus disorder prediction 301 328 - -
Seca4g03050 1035 ProSiteProfiles PX domain profile. 561 680 IPR001683 GO:0035091
Seca4g03050 1035 MobiDBLite consensus disorder prediction 309 328 - -
Seca4g03050 1035 MobiDBLite consensus disorder prediction 17 37 - -
Seca4g03050 1035 CDD PX_domain 568 667 - -
Seca4g03050 1035 SMART DUF4206_2 761 968 IPR025258 -
Seca4g03050 1035 MobiDBLite consensus disorder prediction 161 176 - -
Seca4g03050 1035 MobiDBLite consensus disorder prediction 145 177 - -
Seca4g03050 1035 MobiDBLite consensus disorder prediction 365 388 - -
Seca4g03050 1035 Pfam Putative zinc-RING and/or ribbon 761 964 IPR025258 -
Seca4g03050 1035 PANTHER PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN 38 972 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03050 Seca-Chr4 52231355 52238791 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03050 - - gmx:100800081 1381.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03050 4 52231355 52238791 Seca4g03050 4 52231355 52238791 ECH