Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03046 ATGGGGTCTATCCTGTCTTCCCAGAACACTCAGATGAGTGCACAAGAGATGGAAACGGCCTTGAATAAGGCTAAGGAGTTAGCATCCTCTTCCCCAGTCTTTGTCTTCAGTAAGACTTACTGTGGTTACTGCAAGCGGGTCAAGGATCTCTTAACACAGCTAGGAGCAACCTACAAGGTCTTTGAATTGGATACGGAAAAGGATGGGGGTGAGATTCAATCAGCTCTAGCTGAGTGGACAGGACAGAGGACTGTGCCTAACGTGTTTATTGGAGGGAAGCACATTGGTGGTTGTGACAGTAAGGCCACACTCCTTTTCCATTTGGTGCCTAAATTCCCATGA 342 0.4737 MGSILSSQNTQMSAQEMETALNKAKELASSSPVFVFSKTYCGYCKRVKDLLTQLGATYKVFELDTEKDGGEIQSALAEWTGQRTVPNVFIGGKHIGGCDSKATLLFHLVPKFP. 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03046 113 NCBIfam glutaredoxin 33 101 IPR011899 -
Seca4g03046 113 ProSiteProfiles Glutaredoxin domain profile. 21 113 - -
Seca4g03046 113 FunFam Glutaredoxin 2 18 107 - -
Seca4g03046 113 SUPERFAMILY Thioredoxin-like 22 99 IPR036249 -
Seca4g03046 113 Pfam Glutaredoxin 33 95 IPR002109 -
Seca4g03046 113 CDD GRX_GRXh_1_2_like 32 104 - -
Seca4g03046 113 PANTHER GLUTAREDOXIN 2 9 104 - -
Seca4g03046 113 Gene3D Glutaredoxin 12 108 - -
Seca4g03046 113 PRINTS Glutaredoxin signature 92 105 IPR014025 -
Seca4g03046 113 PRINTS Glutaredoxin signature 33 51 IPR014025 -
Seca4g03046 113 PRINTS Glutaredoxin signature 78 91 IPR014025 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03046 Seca-Chr4 52191904 52194462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03046 21 112 Miscellaneous Gene Families AT4G15670 34.043 1.74e-13 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03046 K03676 - pvy:116146498 163.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03046 4 52191904 52194462 Seca4g03046 4 52191904 52194462 ECH