Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03018 ATGAGCGCTACAGAAATTGTGGATTTATCTAGTGATGATGAAACTGAAACTGAAACTGAGAAGGCTGGCCTCAAAGCTGTTAAATTGGAGACAGATTTTACAACAGGTGTAATGCAACAAAATAAGACTGACAAAGGCCAACTAGCCAAGCATAAGAGATCTCGAAGCCATGCTACTAGACAAGATTCTGAAGAGAATATAAGCTCTAGTAATCCAAGTGCAGGTCATAGTAACTCTAGTGTATTGGAACAGGGAACATCGCCGGTTGATGACACAGGCATTTCATATGCGTCACCCATTTGTGCAGCCCCTCTTTGTAGGCAGTTTTGGAAAGCTGGAAGCTATGATGATGGGCTCGGTTCTAAAGTCACCGTCCAAAATGCAAAAAACTATCTACATGTAAACCCGATGTTCCTTCACTCGAATGCAACTTCACATAAGTGGGCATTTGGTGCCATAGCAGAGCTTCTTGATAACGCAGTTGATGAGATCCAAAATGGGGCTACCTTTGTCATTGTAGATAAAACTTTAAATCCAAGGGATGGAAGTCCAGCATTGTTGATTCAAGATGATGGTGGTGGAATGGATCCGGACGCACTGCGTCGTTGTATGAGTTTTGGATTTTCAGATAAAAAGTCAAAATCTGCAATTGGACAGTGTATGGATTGTGACCTTCTTTCTGCTACCATTTTGCTATTTTCTTTCATATTTATTTTTCAATTTGGTGCTCTAGATGGAAATGGCTTCAAGACTAGTAGTATGAGGCTTGGTGCAGATGTCATAGTCTTCAGTCGCCATATGAAAAACAGGATTTTGACTCAAAGCATTGGACTTCTGTCATATACATTTTTAACGCGAACACACCTTGACAGGATAGTAGTGCCCATGGTGAATTATGAGTTTAATACCTCAACTGGATCATTGGAAATCTTAAATGGCCAAGAGCATTTTGTGGCTAATTTATCATTGCTGGTGCGTTGGTCTCCATATTCATCCGAAGCAGATCTTCTGAAACAAGTAAGTTTTTCATTTTCCCTTTCGTCCCTGATAATTTGCTGA 1059 0.4042 MSATEIVDLSSDDETETETEKAGLKAVKLETDFTTGVMQQNKTDKGQLAKHKRSRSHATRQDSEENISSSNPSAGHSNSSVLEQGTSPVDDTGISYASPICAAPLCRQFWKAGSYDDGLGSKVTVQNAKNYLHVNPMFLHSNATSHKWAFGAIAELLDNAVDEIQNGATFVIVDKTLNPRDGSPALLIQDDGGGMDPDALRRCMSFGFSDKKSKSAIGQCMDCDLLSATILLFSFIFIFQFGALDGNGFKTSSMRLGADVIVFSRHMKNRILTQSIGLLSYTFLTRTHLDRIVVPMVNYEFNTSTGSLEILNGQEHFVANLSLLVRWSPYSSEADLLKQVSFSFSLSSLIIC. 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03018 352 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 39 341 IPR045261 GO:0016887
Seca4g03018 352 MobiDBLite consensus disorder prediction 63 87 - -
Seca4g03018 352 MobiDBLite consensus disorder prediction 1 87 - -
Seca4g03018 352 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 151 270 - -
Seca4g03018 352 Gene3D - 121 290 IPR036890 -
Seca4g03018 352 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 149 214 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03018 Seca-Chr4 51776728 51779899 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03018 - - gmx:100795667 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03018 4 51776728 51779899 Seca4g03018 4 51776728 51779899 ECH