Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03006 ATGAATAACATGAGCAGTCCAACTTGTGAAAACCCTCCTCCACCACCATCAGAATGGTTAGAGGACACGCTTATCGATCTTTACTTATCTGGCTACAACAACATAGCAGTTAGTACAGCTGATACAGCAACAGTGCCCTTGGAAACAGACTATGGATATAACTCTAAGTTAGCAGCTGATGCCTACCACAATACTTATGAAGTGGAAGGTGAGCGGATCCCAAGCCTAGTGAATCAAAATGGCATAGCTGATAATAAAAGTACTGTAGATGAAGGTATAGCTTACAGTAATACTTATGAAGTGGAAGAAGGTGAGTGGATCCCTGACCCAGAGGACGGAAATGACATAGCTGATAGAAGTATCATAGATGAAGGTATCTTGTTGGATGAAGAAAAATGGCGTGCACAGTATGGTCAAGTAATTGAATCAGGGAAAGATCTGGTTTCAGAATCTCCAATTGTGGACTTGTGGGATTGGGAAATGGTTAGAGGATCCAGAAAAGATGGAAAAGATAAGGCAGCAAGGTTGGTCGGAAGACTAGTGAAACAATCTGCAAAGTGTCATCCATCTATCCCTTGTGGTGGAGGGAAAGTAAGATCTGCTCCTATCTGTGAAGTGCATCTTGATCTGGTACGAGTGAAAACAGGACAAGTGTACAAGTTGCGAAATCCTAGTGCAAGATATGTGGCTTCATTATCAACTTATGATTCCGCCAATCCAACAAAAGATTGGGATTTTCCTCAGTTATCATCTAATAGAAATACCGCTCATGTCTCTAAGTCCGGTGAAAGTACTGCTTCAGCTTCAGATGAAATTCCTGTAGAGAAGGATTTATCTATGTTGCCAAGTCAGCCCTCTGCATCCAAGCAAATAAAATATCAATACAGAGATAGAGCTGCTGAAAGAAGAATCTTGCATGGTGGCTTTGGTGTGGGTCCAGGACAGAAGAATCTGGTAATCAGTTATGATAGGCCATCATCCCCTGTTGCTTGTTCTCCACAAGAAGCTACATCAGAGGCCTTGGAGATGTCATTTGGAGCAGGGAGTTATGCCAGGAAACTTCTAGAAAGCATGGGTTGGAAGGAGGGGGAAGGGCTTGGCAGTTCCACCAAGGGGTTGGTAGAACCTATTCAACCAGTTGGAAACATTGGCAGTGCTGGCTTGGGATATCGTCGTGATTGA 1182 0.4323 MNNMSSPTCENPPPPPSEWLEDTLIDLYLSGYNNIAVSTADTATVPLETDYGYNSKLAADAYHNTYEVEGERIPSLVNQNGIADNKSTVDEGIAYSNTYEVEEGEWIPDPEDGNDIADRSIIDEGILLDEEKWRAQYGQVIESGKDLVSESPIVDLWDWEMVRGSRKDGKDKAARLVGRLVKQSAKCHPSIPCGGGKVRSAPICEVHLDLVRVKTGQVYKLRNPSARYVASLSTYDSANPTKDWDFPQLSSNRNTAHVSKSGESTASASDEIPVEKDLSMLPSQPSASKQIKYQYRDRAAERRILHGGFGVGPGQKNLVISYDRPSSPVACSPQEATSEALEMSFGAGSYARKLLESMGWKEGEGLGSSTKGLVEPIQPVGNIGSAGLGYRRD. 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03006 393 PANTHER RNA-BINDING PROTEIN 8 391 - -
Seca4g03006 393 MobiDBLite consensus disorder prediction 242 268 - -
Seca4g03006 393 Pfam G-patch domain 349 391 IPR000467 GO:0003676
Seca4g03006 393 MobiDBLite consensus disorder prediction 242 290 - -
Seca4g03006 393 ProSiteProfiles G-patch domain profile. 347 393 IPR000467 GO:0003676
Seca4g03006 393 SMART G-patch_5 345 391 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03006 Seca-Chr4 51580325 51585111 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03006 - - gmx:100806477 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03006 4 51580325 51585111 Seca4g03006 4 51580325 51585111 ECH