Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02953 ATGGCACATGAAAACATGTTCTCCCTATCTTGTAGTAAAATCACAATCACTATCTTATTCTTGGTTTTTGTTGGATTTAGTGATGGTGCCAAATCCAATGGAAAAATAAGATCCTCTCAAGGGAGGAAGGGACAGTGGCAACTGCTCCTTAACAACACTGGCGTTGTTGGTATGCATATGGCTTTAACATACAAAAACACAGTCCTAATGTTTGATCAAACAGGAGCTGGCCCATCTAGTTACCAACTTCGTAAACGCTTCAATGGAAGCATGTGTACCAAAAGCCACAATGATTTGATGGACTCAACATGCTATGCTCACTCTGTAGAGTATGACATCAGTTCCAACAAAGTGAGACCTTTGAGGCTTGACACTGATCCTTGGTGTTCCTCTGGTTCTTTTCTAAGCAATGGAACACTTTTACAAACAGGTGGATATGGCCAAGGTGCTAAAAGGGTCAGATTCTATAGACCCTGTGGGAATCATCAATGTGATTGGATTCAATCAAAGAAATCCCTATCTGATGAAAGATGGTATGCTTCTAGTCAGATACTACCAGAACATGACAGAGTCATCGTTGTTGGTGGAAGAAGGGTTTCCACATTTGAATTTGTACCAAAAACTAGTCTTGGAGAAAAATCTTTTAACCTTCCATTCTTGCACCAAACCTTTGATAGAAATTCAGGAGGGAACAACCTCTATCCCTTCCTTCACCTTTCATCAGATGGAAACTTGTTCATTTTTGCCAACCGTGATTCCATTTTACTCAACTTGAGAAGAAACAGAGTAATCAAGACCTTCCCTAGGATTCCAGGAGATGGGTCAAGAAACTACCCAAGCTCTGGTTCTTCTGTGTTACTCCCATTAGACCATAGAGACAACTTTGAGAAAGTTGAAGTTATGGTGTGTGGAGGTTCAGCTACTGGGGCATTTAAAGCTGCTAGTAAAGGAAGGTTCTTGGAAGGTTTAAGATCTTGTGGGAGAATGGTGATCACAGGGAATGCGAACAAGTGGAATATGGAGTACATGCCCAAACCACGTTTCCTTCATGACATGCTAATTCTCCCAACTGGTAACATCCTAATTATAAATGGTGCTAAACATGGTTGTGCAGGATATGACAATGCTAGAAATGCTTCTCTTGAACCTTATCTTTATAACCCAAACAAAAAACTTGGAAAAAGGTTCACAGTTCTTAGGTCCACTAAGATAGCTAGAATGTATCACTCATCAGCAACTCTGCTTCCTGATGGAAGGGTCTTGGTTGCGGGTAGTAATCCTCATGGGAGGTACACCTTTCACAATGTGGCATATCCAACGGAATTGAGACTTCAAGCATTTGTTCCACACTACATGGAAAAGAGGTACCATAGCTTAAGACCAAGTAACTTGACCATAGAACATGGTGGTGGTGATAGATATGCAATTGGGTATGGAACAGAGTTTAGAGTTCGGTTTTTGTTAGGGAGGAGGCTAAGTGATGAGGTGAGGTTCAGTGCCTATTCACCACCATTTACTACACATTCCTTCGCTATGAATCAGAGGATGCTGAAGCTGAGGTGTAAGAGTATGGTGAGAAATGGTGATGGGTGGGTGCATGCAGTGTTAGAAGCTCCACCATCACCAAATGTTGCACCTTCTGGTTATTACTTGCTCACGGTTGTGAATGAAGGAATTCCAAGCTTGTCTCAGTGGGTTCAGTTTGTGCACGCCTAG 1716 0.4184 MAHENMFSLSCSKITITILFLVFVGFSDGAKSNGKIRSSQGRKGQWQLLLNNTGVVGMHMALTYKNTVLMFDQTGAGPSSYQLRKRFNGSMCTKSHNDLMDSTCYAHSVEYDISSNKVRPLRLDTDPWCSSGSFLSNGTLLQTGGYGQGAKRVRFYRPCGNHQCDWIQSKKSLSDERWYASSQILPEHDRVIVVGGRRVSTFEFVPKTSLGEKSFNLPFLHQTFDRNSGGNNLYPFLHLSSDGNLFIFANRDSILLNLRRNRVIKTFPRIPGDGSRNYPSSGSSVLLPLDHRDNFEKVEVMVCGGSATGAFKAASKGRFLEGLRSCGRMVITGNANKWNMEYMPKPRFLHDMLILPTGNILIINGAKHGCAGYDNARNASLEPYLYNPNKKLGKRFTVLRSTKIARMYHSSATLLPDGRVLVAGSNPHGRYTFHNVAYPTELRLQAFVPHYMEKRYHSLRPSNLTIEHGGGDRYAIGYGTEFRVRFLLGRRLSDEVRFSAYSPPFTTHSFAMNQRMLKLRCKSMVRNGDGWVHAVLEAPPSPNVAPSGYYLLTVVNEGIPSLSQWVQFVHA. 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02953 571 SUPERFAMILY Galactose oxidase, central domain 109 452 IPR011043 -
Seca4g02953 571 Pfam Galactose oxidase-like, Early set domain 476 567 IPR015202 -
Seca4g02953 571 SUPERFAMILY E set domains 458 567 IPR014756 -
Seca4g02953 571 Gene3D - 40 459 IPR037293 -
Seca4g02953 571 Gene3D Immunoglobulins 466 571 IPR013783 -
Seca4g02953 571 CDD E_set_GO_C 476 567 IPR015202 -
Seca4g02953 571 Pfam Glyoxal oxidase N-terminus 58 305 IPR009880 -
Seca4g02953 571 PANTHER SECRETED PROTEIN-RELATED 17 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02953 Seca-Chr4 50671025 50672740 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02953 - - gmx:100814200 975.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02953 4 50671025 50672740 Seca4g02953 4 50671025 50672740 ECH