Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02941 ATGGCCAGCAACCCTCGTCAGCTAGTAGCTGCTCCTAGTAAAATGCAACAAAGGAAGGAACGACGCTTGTTCTCCACATCTGATGACAGTGCCATGATGAAGCAAGTTCAAGCAACTCATGCCCCTGATGGTCGTGAAATTGAAGTCAAACCCATTATCCAAATCATTGATGAAATCTTGATTCAAGTCATTGCCCGCAGTGTTGAGGGTCATGATGTGAAACAAGAACAAGAAACATTGGAGACTGCTGCTGCTTTGGCTGAATTTGACATGCTTGAATCCCTGGCTTTTATCATTAACAAAATTTCATGCGAGCTTTCATGCAAGTGCTCAGGAGGTGGAGATGCACATGCATCAACTATGGTGTTACTGAATTACCTGTCTAGTTATGCATGGCATGCAAAAGTTGTGTTAACCTTAGCAGCCTTTGCTGTTATTTTTGGGGAGTTTTGGCTTGTTTCTCAATTGAGTGCTGCAAATATACTTGCCAAATCTGTGGCCCTCCTTAAGCAACTTCCTGACATTGTAGACAATTCTGTGTCTTTGAGACCCCAATTTGATGCACTCAACAAGCTTGTGAGGGCAGCATTGGATGTAACCATGTGCATTGTTGAATTCAAGGAGCTTCCATCTGAATATATCTCAGAGGATGTGCCTCCTATGTCTGTTGCCAGTGCTCATATTCCTATTGCTGCCTATTGGGTCATCAGAAGTATTGTGGCTTGTGCCTCACAAATTGCCAGTCTCATAGGCATGAGAAATGAGTCCATTTCATCAGCCACAGAGGCATGGGAATTATCTAGTTTGGCTCACAAAGTCAGTAGTATATATGAGCACCTCAAGAACCAACTGGCTCTTTGCTACCAGTATATTGATGACAAGAGGCATATAGAGGCCTTCCATAATCTTATACGTCTATTTGAGACAGTCCATATAGACAACATGAAAATTCTCAGGGCACTGATATATGCCAAGGATGATCTTCCTCCACTTATAGATGGAGCTACAAAATCAAGGGTTTGTTTATTTTTATTTATTTATTTATTCTAG 1050 0.4171 MASNPRQLVAAPSKMQQRKERRLFSTSDDSAMMKQVQATHAPDGREIEVKPIIQIIDEILIQVIARSVEGHDVKQEQETLETAAALAEFDMLESLAFIINKISCELSCKCSGGGDAHASTMVLLNYLSSYAWHAKVVLTLAAFAVIFGEFWLVSQLSAANILAKSVALLKQLPDIVDNSVSLRPQFDALNKLVRAALDVTMCIVEFKELPSEYISEDVPPMSVASAHIPIAAYWVIRSIVACASQIASLIGMRNESISSATEAWELSSLAHKVSSIYEHLKNQLALCYQYIDDKRHIEAFHNLIRLFETVHIDNMKILRALIYAKDDLPPLIDGATKSRVCLFLFIYLF. 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02941 349 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 13 341 IPR039299 GO:0010088
Seca4g02941 349 Pfam Sieve element occlusion N-terminus 27 311 IPR027942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02941 Seca-Chr4 50542684 50546312 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02941 - - gmx:100811452 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02941 4 50542684 50546312 Seca4g02941 4 50542684 50546312 ECH