Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02932 ATGGCTACGAGTGGACAACACAACCCTGCTCTTGACCCGGATTTGGATACTCCAGACAACCCGGATCACGAGTTTGCTGAGTTCGGAGCTGGTTGTTTCTGGGGTGTGGAGTTGGCCTTTCAGCGTGTTGCGGGAGTCGTCAAGACTGAGGTTGGATATACGCAGGGTCACACCCCCGATCCTCGCTACAAACTCGTCTGCACCGGAACCACTAACCATGTTGAGGTGGTTCGGGTTCAGTTCGACCCTAAAGTCTGCCCCTACACAAATCTCCTCCATCTCTTTTGGTCTCGACATGACCCCACTTCCCTCAATCGCCAGGGCAATGATGTGGGTGCACAGTATAGATCAGGGATTTACTACTACAATGAAACCCAGGCTCGTTTAGCCCAAGAATCAAAAGAAGCTAAAGAGTTGGAATTGAAGGAAAAGATTGTGACAGAAATTCTTCCAGCAAAGAGGTTCTACAGAGCAGAGGAATATCATCAGCAATATCTGGAGAAGGGTGGAGGTAAAGGCCTCAAACAGTCTGCAGAAAAGGGCTGCACTGATCCCATCAGGTGCTATGGCTGA 573 0.4991 MATSGQHNPALDPDLDTPDNPDHEFAEFGAGCFWGVELAFQRVAGVVKTEVGYTQGHTPDPRYKLVCTGTTNHVEVVRVQFDPKVCPYTNLLHLFWSRHDPTSLNRQGNDVGAQYRSGIYYYNETQARLAQESKEAKELELKEKIVTEILPAKRFYRAEEYHQQYLEKGGGKGLKQSAEKGCTDPIRCYG. 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02932 190 MobiDBLite consensus disorder prediction 1 21 - -
Seca4g02932 190 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 23 180 IPR002569 GO:0008113
Seca4g02932 190 Gene3D Peptide methionine sulphoxide reductase MsrA 12 190 IPR036509 GO:0008113
Seca4g02932 190 NCBIfam peptide-methionine (S)-S-oxide reductase MsrA 25 168 IPR002569 GO:0008113
Seca4g02932 190 PANTHER PEPTIDE METHIONINE SULFOXIDE REDUCTASE 7 189 - -
Seca4g02932 190 Pfam Peptide methionine sulfoxide reductase 27 169 IPR002569 GO:0008113
Seca4g02932 190 SUPERFAMILY Peptide methionine sulfoxide reductase 19 171 IPR036509 GO:0008113
Seca4g02932 190 FunFam Peptide methionine sulfoxide reductase 12 190 - -
Seca4g02932 190 Coils Coil 122 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02932 Seca-Chr4 50456508 50458409 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02932 K07304 - gmx:100527085 347.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02932 4 50456508 50458409 Seca4g02932 4 50456508 50458409 ECH