Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02919 ATGGCGGATGATAGCAATCGCAGCGTGAGACTGCTATGCCGCCCAAAACATCTCAACAAAGGATCCGACCCAGGAATCCACTACTGGCTTGTCGGATCCCCATTCTTGCCGCCACTGACCATCGCCTCCATTCTCCGATGCATCCACACCCTCGCCTCCTCCTCATCTCCAGATTTACGCAAAGAATCAGAGGATCTTCGGACCTTGATTCCGAAAGGCTTTGAAGTAATCGGAGCCCTAGTTACCGGAGACGACACCGGTGCTCGTGCGGCCATTGATGCTGCCTGTGAATTGAGGAAGCTCCTTTACGGCGAAGGAACGGGTGAAGATCAACCGCTGATCGGAGCAGTTTTCGGTTCGGATTCCGGCGACCTGCGATTTTTTGTGTCCGAGAGTAGAAATGCGACAAGCCTCGATCCTGTTACGTCCATCATACATGAACAGCATCCTGAAAAGTGTGTGTGGGAGAATGGTTGCTTGCTTCGTTGTGAGCTTCCGATTAAGTTGCCGCTTTATTACCCTCTCAAAAATCCAACCGATGTTGAGAAAGCATATGTACGGGCAACCGAAGCTATTATTGCCAAGTTAAGAGACCCTCAGGCTGTGTATATATTAGAAACATTGAACAAAACCTCTATGGATGTACCTGCACCTGCCATAATTCGAGGTGTACAATTAGACCTTCATACAAACCTCTCCAAGACCAGGCTGGCTAAGGGCGATGATGGCTTTGATGCAAGCTCACTATCGTGTTCATACTTTTCCCTCAACAGTAAAGCAGGTTCACCAGCTTTTTCTGCGGAGAATGCAGATACTATCCAAGTTAGTGTTTTCTTTAATAGCTTAGGGCCATCATCAGAATCAGCTGCGCCTGTTGCAGAGTACCATCCTGTCCAGGAAGAAGCCAGACTCGTTGTTGTGGATACCAAGCTAGATGTACTCTGCTATTCTTCCAGGGAGCTTCCACTGAGACACGCAGTTTCAAGTTTAATCATCCCTGGCTTAATTGACCAGTTAAATATACTGCAGAATTCAATGTTGCCTAACCTTTTGGCACAACATCCTCAGCTTAAAGCTTTTCACTTTAGTCCGCCTGGGATTCTGCATCCAATAACTGTTTTCTATGAACTGAGATTTGGTGAGACAGAAATGAAGCAAGTTGAAGTTAGGAGATCCTTGCACTCAAGGTTGGGATTACCTTATGATCGTCCCCTTCTAAGAATTGCTAATGCCTTGGATATTTCAAAATTAAAAAACAGTGGTACTGTTTCTGTGCAAAAAGGTTCAACTTTACTCAGAGATGTACACATTGGGATTCCAAGCAGTGGGGTTACTGGGGGAACTGTTTCCCTTGTTCAAGGTTCCTATGAATACTTTCATTATCTTCAGGATGGTTATAATGATTCGGGATGGGGTTGTGCTTATCGCTCTCTCCAGACTATCATTTCATGGTTCAGACTCCAAAACTACTCATCCATAGAAGTTCCTTCTCATAGGTATTTACAGATTACCTCCTCTATTGATGGATTTGTTTTCAGGGGAGAAATACAGCAGTCACTTGTTGAGATTGGCGACAAAGATCCTTCTTTTATTGGGTCACGAGAATGGATTGGTGCCATTGAGTTGAGCTTTGTCTTGGACAAACTTCTGGGTGTCACTTGCAAAGTCATCAATGTGAGATCTGGAGCTGAGCTTCCGGAAAAATGTCGAGAGCTAGCATTGCACTTTGAGACCCAAAGTACACCTGTTATGATTGGTGGTGGTGTACTTGCATATACACTCTTAGGAGTGGATTACAATGAAGCAAGTGGAGATTGCGCATTTTTAATACTCGATCCACACTATACAGGTACGGATGATCTGAAGAAAATAATCAATGGGGGATGGTGTGGGTGGAAAAAGGCTGTTGATAACAAGGGAAAGAATTTCTTCTTGCATGATAAGTTTTATAATCTACTGCTGCCACAGAGGCCCAACATGGTTTGA 1986 0.4471 MADDSNRSVRLLCRPKHLNKGSDPGIHYWLVGSPFLPPLTIASILRCIHTLASSSSPDLRKESEDLRTLIPKGFEVIGALVTGDDTGARAAIDAACELRKLLYGEGTGEDQPLIGAVFGSDSGDLRFFVSESRNATSLDPVTSIIHEQHPEKCVWENGCLLRCELPIKLPLYYPLKNPTDVEKAYVRATEAIIAKLRDPQAVYILETLNKTSMDVPAPAIIRGVQLDLHTNLSKTRLAKGDDGFDASSLSCSYFSLNSKAGSPAFSAENADTIQVSVFFNSLGPSSESAAPVAEYHPVQEEARLVVVDTKLDVLCYSSRELPLRHAVSSLIIPGLIDQLNILQNSMLPNLLAQHPQLKAFHFSPPGILHPITVFYELRFGETEMKQVEVRRSLHSRLGLPYDRPLLRIANALDISKLKNSGTVSVQKGSTLLRDVHIGIPSSGVTGGTVSLVQGSYEYFHYLQDGYNDSGWGCAYRSLQTIISWFRLQNYSSIEVPSHRYLQITSSIDGFVFRGEIQQSLVEIGDKDPSFIGSREWIGAIELSFVLDKLLGVTCKVINVRSGAELPEKCRELALHFETQSTPVMIGGGVLAYTLLGVDYNEASGDCAFLILDPHYTGTDDLKKIINGGWCGWKKAVDNKGKNFFLHDKFYNLLLPQRPNMV. 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02919 661 PANTHER UFM1-SPECIFIC PROTEASE 2 70 661 - -
Seca4g02919 661 Gene3D - 429 661 - -
Seca4g02919 661 ProSiteProfiles Rhodanese domain profile. 623 641 IPR001763 -
Seca4g02919 661 Pfam Peptidase family C78 448 653 IPR012462 -
Seca4g02919 661 SUPERFAMILY Cysteine proteinases 465 618 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02919 Seca-Chr4 50236759 50243506 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02919 K01376 - gmx:100819651 1071.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02919 4 50236759 50243506 Seca4g02919 4 50236759 50243506 ECH