Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02908 ATGGATATGCCTTCGGCAAAGCCTGTTAGTGAAATGTTGCCATTCAGTGTTTTCACCCCATACTATAGTGAAACAGTGCTTTATAGTACATCTGAATTGCAAAAGGAGAATGAAGATGGAATATCTACTCTTTTCTATCTTCAAAAGATATTTCCAGATGAATGGGACAACTTTCTCGAAAGAATTGGTCGTGGAGTGTCTACGGGTGATGAAGAACTTCAAGAGAGTTCCAGTGACTCTTTGGAGCTCCGTTTTTGGGCATCTTATCGAGGGCAGACTCTGGCAAGGACAGTGCGTGGTATGATGTATTATAGGAGGGCTTTAATGCTGCAGAGCTATCTTGAGAGCAGATCACTCGGAGTGGACAATTATTCTCGGAACAACTTCTTTACAAGTCAAGGTTTTGAATCATCACGTGAGTCACGGGCACAAGCAGATTTGAAGTTTACTTACGTTGTATCATGTCAAATTTATGGTCAGCAAAAACAGCGAAAAGCACCAGAAGCTGCTGATATTGCCCTCTTATTACAGAGGAATGAGGGACTCCGAGTTGCTTTCATTCATGTTGAAGAAAATACAACAGACGCAAACACCCCCAGAGTGTTTTATTCAAAACTTGTTAAAGCTGATATAAATGGAAAAGATCAGGAAATTTATTCTATTAAACTTCCTGGGGACCCAAAGCTTGGTGAAGGAAAGCCTGAAAACCAAAACCATGCTATAGTTTTCACTCGTGGTGATGCCATTCAAACTATCGACATGAATCAGGACAATTATCTCGAGGAGGCAATGAAAATGAGAAATCTTCTTGAGGAGTTTCATGCAGATCATGGCCTTCGACCTCCAAGCATTCTTGGAGTGAGGGAACATGTTTTTACAGGAAGTGTGTCATCCTTGGCTTGGTTCATGTCAAATCAAGAAACTAGCTTTGTAACGTTGGCCCAACGTGTTTTAGCATATCCTCTCAAAGTCCGTATGCACTATGGACACCCAGATGTATTTGACAGAATATTTCACATAACTCGAGGAGGCATCAGTAAAGCATCGCGTGTCATTAATATTAGTGAAGATATATACTCTGGTTTTAACTCTACATTGCGGCTTGGAAATGTCACACACCATGAATACATTCAGGTTGGAAAAGGAAGGGATGTTGGGTTAAACCAGATTGCCCTCTTTGAAGGGAAAGTGGCAGGTGGTAATGGAGAGCAAGTGCTTAGCAGGGATGTTTACAGGCTTGGACAACTTTTTGATTTCTTTAGAATGCTTTCTTTCTATTTCACAACTGTTGGTTATTATGTCTGTACCATGATGACAGTCCTCACAGTATATATATTCCTATATGGAAGGGCATACCTGGCATTCTCTGGTCTTGATGAAGATGTCTCAGAGAAGGCAAAATTAATGGGTAACACAGCACTTGATGCAGCTCTGAATACTCAATTTTTGGTCCAGATTGGTGTTTTTACTGCAGTACCAATGATAATGGGTTTTATACTTGAATTAGGATTGCTGAAGGCAGTTTTCAGCTTCATCACAATGCAACTTCAGTTGTGTGCTGTCTTCTTCACTTTTTCATTGGGAACTAGAACTCATTATTTTGGGCGTACTATTCTCCATGGGGGTGCTAAATACCGAGCTACTGGTAGAGGGTTTGTTGTCCGTCATATAAAGTTTGCTGAAAATTACAGACTATATTCTAGGAGCCACTTTGTCAAAGCGCTTGAAGTTGCACTACTACTTGTAGTTTATATCGCATATGGATATGCAGAGGGAGGTGCTGTTACATATGTTTTGCTAACTCTTAGCAGTTGGTTCCTTGTCATTTCTTGGCTTTTCGCTCCTTATATTTTCAATCCCTCTGGTTTTGAGTGGCAAAAGACTGTGGAAGATTTTGATGATTGGACAAATTGGCTGCTTTACAAAGGAGGAGTAGGAGTAAAGGGAGAAAATAGTTGGGAGTCTTGGTGGGATGAAGAACAGATGCATATCCAAACTTTGAGGGGTCGTATCTTGGAGACAATCTTGAGTGCGAGGTTCTTCTTGTTTCAATATGGTGTTGTGTATAAGCTACATCTTACCGGAAACAATACGTCACTTGCGATATATGGATTCTCGTGGGTTGTATTGGTTGGATTTGTCTTGATATTTAAGATCTTTACCTACAGCCCAAAGAAATCTGCGCATTTTCAGCTAGTATTGCGATTTTCACAAGGAGTTGCTGCTATAGGCCTTGTTGCAGCTGTGTGTCTTGTTGTTGCCTTTACTTCACTTTCAATAGCTGACCTTTTCGCAAGCATCCTTGCATTTATCCCTACGGGATGGGGAATATTATCTTTGGCAATTACGTGGAGGAGGATACTTTGGAGTCTCGGCTTGTGGGATTCTGTTCGTGAGTTTGCTAGAATGTATGATGCTGGAATGGGTATGATTATTTTTGCACCAATAGCATTTTTATCATGGTTTCCATTCATTTCCACTTTCCAGTCTCGCCTTCTCTTTAATCAAGCCTTCAGCCGTGGTCTTGAAATCTCCCTCATCCTTGCTGGAAATAAAGCTAATGTTGAGGCTTAG 2574 0.4083 MDMPSAKPVSEMLPFSVFTPYYSETVLYSTSELQKENEDGISTLFYLQKIFPDEWDNFLERIGRGVSTGDEELQESSSDSLELRFWASYRGQTLARTVRGMMYYRRALMLQSYLESRSLGVDNYSRNNFFTSQGFESSRESRAQADLKFTYVVSCQIYGQQKQRKAPEAADIALLLQRNEGLRVAFIHVEENTTDANTPRVFYSKLVKADINGKDQEIYSIKLPGDPKLGEGKPENQNHAIVFTRGDAIQTIDMNQDNYLEEAMKMRNLLEEFHADHGLRPPSILGVREHVFTGSVSSLAWFMSNQETSFVTLAQRVLAYPLKVRMHYGHPDVFDRIFHITRGGISKASRVINISEDIYSGFNSTLRLGNVTHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDVYRLGQLFDFFRMLSFYFTTVGYYVCTMMTVLTVYIFLYGRAYLAFSGLDEDVSEKAKLMGNTALDAALNTQFLVQIGVFTAVPMIMGFILELGLLKAVFSFITMQLQLCAVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVRHIKFAENYRLYSRSHFVKALEVALLLVVYIAYGYAEGGAVTYVLLTLSSWFLVISWLFAPYIFNPSGFEWQKTVEDFDDWTNWLLYKGGVGVKGENSWESWWDEEQMHIQTLRGRILETILSARFFLFQYGVVYKLHLTGNNTSLAIYGFSWVVLVGFVLIFKIFTYSPKKSAHFQLVLRFSQGVAAIGLVAAVCLVVAFTSLSIADLFASILAFIPTGWGILSLAITWRRILWSLGLWDSVREFARMYDAGMGMIIFAPIAFLSWFPFISTFQSRLLFNQAFSRGLEISLILAGNKANVEA. 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02908 857 Pfam 1,3-beta-glucan synthase component 1 756 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Seca4g02908 857 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 850 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02908 Seca-Chr4 50067950 50084877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02908 1 856 Glycosyltransferase AT2G36850 81.839 0.0 1463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02908 K11000 - gmx:100777959 1627.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02908 4 50067950 50084877 Seca4g02908 4 50067950 50084877 ECH