Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02870 ATGGCCTCAAGCAGTGCACCTAATTTGGAAGATGTTCCCTCCATGGATCTCATGTCCGAGCTCCTCCGTCGCATGAAGTGTGCCTCCAAGCCTGACAAGCGTCTCATCCTTATTGGTATTCATATTAGTCCACCTGGGTCAGGAAAAGGCACCCAGTCACCGATCATAAAAGATGAGTATTGCTTATGCCACTTAGCTACTGGTGATATGTTAAGAGCAGCAGTGGCAGCTAAAACCCCTCTTGGTATTAAGGCTAAAGAAGCTATGGATAAGGGAGAACTTGTTTCTGATGACTTAGTTGTTGGCATTATAGATGAAGCAATGAAGAAACCATCATGTCAGAAAGGTTTCATTCTTGATGGTTTTCCAAGAACTGTGGTTCAAGCACAGAAGCTTGATGAGATGCTGGACAAGCAGGGAGTTAAAGTTGATAAGGTTCTCAATTTTGCAATTGATGATGCAATCCTTGAGGAGCGGATTACTGGCCGCTGGATACACCCATCCAGTGGCAGAACCTACCATACAAAATTTGCACCTCCCAAGGTTCCTGGGGCTGATGATGTTACTGGTGAACCTCTTATTCAGCGCAAGGATGACACTGCAGCTGTTCTTAAGTCAAGACTGGAGGCATTCCACAAGCAAACTGAGCCGGTTATTGATTACTATTCAAAGAAGGGAATTGTTGCTAGTCTTCATGCTGAGAAACCTCCCAAAGAGGTAACAGCTGAGGTGGAGAAGGTGCTGTCTTAG 750 0.452 MASSSAPNLEDVPSMDLMSELLRRMKCASKPDKRLILIGIHISPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVVQAQKLDEMLDKQGVKVDKVLNFAIDDAILEERITGRWIHPSSGRTYHTKFAPPKVPGADDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVASLHAEKPPKEVTAEVEKVLS. 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02870 249 PRINTS Adenylate kinase signature 213 227 IPR000850 GO:0005524|GO:0006139|GO:0019205
Seca4g02870 249 PRINTS Adenylate kinase signature 40 53 IPR000850 GO:0005524|GO:0006139|GO:0019205
Seca4g02870 249 PRINTS Adenylate kinase signature 68 82 IPR000850 GO:0005524|GO:0006139|GO:0019205
Seca4g02870 249 PRINTS Adenylate kinase signature 196 211 IPR000850 GO:0005524|GO:0006139|GO:0019205
Seca4g02870 249 PRINTS Adenylate kinase signature 117 133 IPR000850 GO:0005524|GO:0006139|GO:0019205
Seca4g02870 249 Hamap Adenylate kinase [adk]. 33 249 IPR000850 GO:0005524|GO:0006139|GO:0019205
Seca4g02870 249 CDD ADK 34 240 IPR000850 GO:0005524|GO:0006139|GO:0019205
Seca4g02870 249 ProSitePatterns Adenylate kinase signature. 117 128 IPR033690 -
Seca4g02870 249 Pfam Adenylate kinase, active site lid 163 198 IPR007862 GO:0004017
Seca4g02870 249 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 248 IPR027417 -
Seca4g02870 249 NCBIfam adenylate kinase 42 248 IPR006259 GO:0004017|GO:0005524|GO:0016776
Seca4g02870 249 PANTHER NUCLEOTIDE KINASE 7 245 IPR000850 GO:0005524|GO:0006139|GO:0019205
Seca4g02870 249 Gene3D - 5 249 IPR027417 -
Seca4g02870 249 Pfam Adenylate kinase 43 226 - -
Seca4g02870 249 FunFam Adenylate kinase mitochondrial 33 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02870 Seca-Chr4 49613023 49616266 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02870 K00939 - cit:102628633 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02870 4 49613023 49616266 Seca4g02870 4 49613023 49616266 ECH