Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02852 ATGGCACCGCACGATCTCCGCCGTCCGTTCAAGCGACCGGCGATCTCCGATCAAGAGAGGCGCAGGCAACAGTCTCTGCTCCGCCAATCACAGAATCGCCTCGACGCTCAGCGCCATGCTCGCTTCTTGGCCTCCACCGCTTTCTCTCTCCCCTCCCAAACACTCGACACACCCGAACCCGAACTTGAAACCCAACCCGAACCCGAACCGGAGTCCAGCCCGCAGCCTTCGCACAAGGACCTCGACGTCCACGAGGCCTCGAAGCTGAAAGGCGCAGAAGCTCGAAAATGGTTCGCCAAACAACTCATGCTCCCCGAATGGATGATCGATATCCCCGATAACCTCTCCCAAGACTGGTTTGTGTTTGCGAGACCTTCTGGAAAACGGTGCTTTGTCGTTTCTTATAACGGAACAACGATAAGCCGTTTGAAGAACGGTTCGATACTGCATCGTTTTCCTTCTGCGTTACCAAACGGGGCAAGGAGAAAGGACGTTTCTTCGGGTTCTTCTCAGTCTTACTCTATTCTGGATTGCATCTTTCACGAGCTGGATCAAACGTACTACGTTATTGACATGGTTTGTTGGCGTGGCTACTCCCTTTACGATTGCACCGCCGAGTTCAGGTTCTTCTGGTTGAATTCCAAGCTTGCAGAGACTGGTGCTTGTGATCCTCCTTCGTATTATCACAAGCATAGGTTCAGTTTGGTTCCGGTGTATGCTTGTGATCGGAATGGTCTCAATGCGGCTTATACGGGGCCGGTGCCTTATGTCAAAGACGGTCTTCTCTTCTATAGCAAGCATGCACATTACCAGGCAGGAATTACGCCGTTAGCATTAGTTTGGAAGGATGAGAATTGCAGTCAATATGTTATGGACACGGACAGTAAAGGACAGGTTCCAAACCAACAACAGGTGTTTTCCCTTGCTTCCTTTGCATCTTCTCGATGCTTGGCTTTCCGTGCCTTTTCTTTGCTGTATACACATTTCAATCACTTTCATGGATTTCTAGCCCTTGTGATTCAATGCTGTATGCATGTATGTATGGTTGGTACCCCTTGTTAG 1062 0.5009 MAPHDLRRPFKRPAISDQERRRQQSLLRQSQNRLDAQRHARFLASTAFSLPSQTLDTPEPELETQPEPEPESSPQPSHKDLDVHEASKLKGAEARKWFAKQLMLPEWMIDIPDNLSQDWFVFARPSGKRCFVVSYNGTTISRLKNGSILHRFPSALPNGARRKDVSSGSSQSYSILDCIFHELDQTYYVIDMVCWRGYSLYDCTAEFRFFWLNSKLAETGACDPPSYYHKHRFSLVPVYACDRNGLNAAYTGPVPYVKDGLLFYSKHAHYQAGITPLALVWKDENCSQYVMDTDSKGQVPNQQQVFSLASFASSRCLAFRAFSLLYTHFNHFHGFLALVIQCCMHVCMVGTPC. 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02852 353 MobiDBLite consensus disorder prediction 46 80 - -
Seca4g02852 353 Gene3D DNA ligase/mRNA capping enzyme 1 307 - -
Seca4g02852 353 MobiDBLite consensus disorder prediction 1 26 - -
Seca4g02852 353 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 97 282 - -
Seca4g02852 353 MobiDBLite consensus disorder prediction 1 34 - -
Seca4g02852 353 CDD Snurportin-1_C 97 284 - -
Seca4g02852 353 PANTHER SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 1 307 IPR017336 GO:0005634|GO:0005737|GO:0061015
Seca4g02852 353 MobiDBLite consensus disorder prediction 46 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02852 Seca-Chr4 49281179 49285444 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02852 K13151 - cave:132176627 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02852 4 49281179 49285444 Seca4g02852 4 49281179 49285444 ECH