Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02829 ATGGCAAAGGCCTGTGTTCTATTGAACCTATGTCTCTTTATTTCCCTGCTCCACTTGAGCTCAGCAGCAAGGAGTCTCAGTACTCAAGACGACCAGCAGTTGCAGTTCCAATACCATAAAGGCCCTCTTCTCACAGGCAAAATCTCCGTCAATCTCATCTGGTACGGTAAATTCAAGCCTTCCCAGCGAGCAATCATCGCTGATTTCATCTCCTCCCTTTCCTCACCCATCAAAGCCCAACCATCCGTCGCCACGTGGTGGAAAGGCACCCAGAAATACTACCAACGCATAAAGTCACCAAAGAACACCCTCGCCCTCACCCTCGGTGCCCAGCTTCTAGACGAGAAATACTCTCTGGGAAAATCACTCACCATCAACCAGATCGTTAAGCTTGCATCCAAGGGTGCTCAGAGAGACGCTATCAACGTGGTTCTCACAGCCGCAGATGTAACCGTTGATGGGTTCTGTTCCAGTCGGTGTGGGACTCACGGTTCCTCAGGAAGTGGTCGCAAAAAATTTGCTTACCTTTGGGTGGGTAACTCAGAGACACAGTGTCCTGGTCAATGCGCGTGGCCTTTTCACCAGCCCATTTATGGCCCACAGAGCCCACCGTTGGTTGCTCCCAACAACGATGTAGGCCTTGATGGCATGGTCATCAACGTGGCTAGTCTATTGGCTGGGACCATAACAAACCCATTTGGGAATGGCTACTTCCAGGGACCCAAAGAGGCACCTCTAGAAGCTGCTTCTGCTTGCACTGGGGTGTACGGAAAGGGGGCTTACCCTGGCTATGCTGGGAACCTCTTGGTGGACCCTACAACTGGCGCTAGCTACAATGCCAATGGCGTCAATGGCAAGAAATATTTGTTGCCAGCACTATTTGACCCTGCTACCTCAGCTTGTTCTACTCTAGTCTAG 918 0.512 MAKACVLLNLCLFISLLHLSSAARSLSTQDDQQLQFQYHKGPLLTGKISVNLIWYGKFKPSQRAIIADFISSLSSPIKAQPSVATWWKGTQKYYQRIKSPKNTLALTLGAQLLDEKYSLGKSLTINQIVKLASKGAQRDAINVVLTAADVTVDGFCSSRCGTHGSSGSGRKKFAYLWVGNSETQCPGQCAWPFHQPIYGPQSPPLVAPNNDVGLDGMVINVASLLAGTITNPFGNGYFQGPKEAPLEAASACTGVYGKGAYPGYAGNLLVDPTTGASYNANGVNGKKYLLPALFDPATSACSTLV. 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02829 305 PANTHER PROTEIN EXORDIUM-LIKE 5 13 305 IPR006766 -
Seca4g02829 305 Pfam Phosphate-induced protein 1 conserved region 37 304 IPR006766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02829 Seca-Chr4 48947125 48948042 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02829 - - gmx:100793598 498.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02829 4 48947125 48948042 Seca4g02829 4 48947125 48948042 ECH
Seca8g01962 8 41202989 41203924 Seca4g02829 4 48947125 48948042 PCT