Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02819 ATGGCTTGGCGCTTCATCTTCTTCATATTCCTCTCCAACATCAAATCCTCTAAAACCCTAACCCTAAAAAACCCTCTGTTCTTCACCGCGCCATTTTCCACCTCCTTCTTGGTCACCAAAACCCCAAAAAAACTCAAGAAAAAACACAAAAACAAAGACAGCCCAAGAACCAAGCCAGTTCAAACCGAACCAAACCGCATCCCCGAATTTGAGCGCATAGTCGAACGCGACGCCCTCTTAAGGTTCGTCACTCGCTCCAAACAATTCCTCTCAAACCAACCGGAGCACGTTCTCCGCCTCGACGACGCCGGCAAGCTCCACCGCGAGCTTGGCTTCCCCCGCGGCCGCAAGGTCTCCCGCTCCATCCAGCGTCACCCTCTCCTCTTCCAAACTTACCGCCACACCGATGGCAAAATGTGGCTCGGCTTCACCGACCTCATGGAAGACCTTCTCTCCGAGGAACAATCCATCATGGACTCCATGGAACAAAACCGCGTCGATAAGGTTCGGAAATTGCTCATGATGTCCGCGGGTAACCGCATTCCCCTCAGCAAGATTCATCACTGCAGAACCCTGTTCGGTATCCCTGATGATTTCCGCGACCGGGTTGCCAAGTACCCGAATTATTTTCGGGTTGTGACTGAGAACGATGGGAAGAGGGTTCTTGAGTTGGTTAATTGGGACTCTCTTTTGGCGGTGAGTGCCCTTGAGAGGGACTTTGTGGTGGATGAGGAAGGTGCCAAGAGGAAGTTTAAGTTTCCTGTGAAATATGGGATGGATTTGGAGTTGGAATTGGATGATGCGAGGAAGCTGAATTTGTTGAACACGCTTCCTTTGGTGTCTCCTTATTCGGATGGGTCCAAATTGGATGTGTGGACCTTGGAAGCAGAGAAGTATAGGGTTGGGGTGATTCATGAGTTCTTGAGCTTGACGTTGGAGAAAAGGGCTTCTATTCATCACATTGTGGAATTCAAGGAGGAGTTTAGTTTGACTAAGCATACTTATCATATGCTTCTTAAGCAGCCAAGAGCGTTTTATTTGGCTGGAACAGAGATGAACTGGGTTGTGTTCTTGAAGGATGCTTATGATCACAATGGCGTTTTGATTGAGAAGGACCCCCAGGTGATCTTAAACGAGAAGCTCCATAAGTATGCTCTGATGCAAGGAATGGAACCTACTTCTGATGTTGAGAATGGGATGGAAAAACAACCTGTAACTTAA 1221 0.4832 MAWRFIFFIFLSNIKSSKTLTLKNPLFFTAPFSTSFLVTKTPKKLKKKHKNKDSPRTKPVQTEPNRIPEFERIVERDALLRFVTRSKQFLSNQPEHVLRLDDAGKLHRELGFPRGRKVSRSIQRHPLLFQTYRHTDGKMWLGFTDLMEDLLSEEQSIMDSMEQNRVDKVRKLLMMSAGNRIPLSKIHHCRTLFGIPDDFRDRVAKYPNYFRVVTENDGKRVLELVNWDSLLAVSALERDFVVDEEGAKRKFKFPVKYGMDLELELDDARKLNLLNTLPLVSPYSDGSKLDVWTLEAEKYRVGVIHEFLSLTLEKRASIHHIVEFKEEFSLTKHTYHMLLKQPRAFYLAGTEMNWVVFLKDAYDHNGVLIEKDPQVILNEKLHKYALMQGMEPTSDVENGMEKQPVT. 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02819 406 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 46 396 IPR045040 GO:0003723
Seca4g02819 406 Pfam Plant organelle RNA recognition domain 66 387 IPR021099 GO:0003723
Seca4g02819 406 MobiDBLite consensus disorder prediction 43 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02819 Seca-Chr4 48734660 48735880 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02819 - - gmx:100809565 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02819 4 48734660 48735880 Seca4g02819 4 48734660 48735880 ECH