Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02813 ATGATGATGAGGGTTTGGGGATCCGAGATCGTGTTTGCCATGTTGCTCTGTGGGACCCTTTCCTGCACCGCACAACAACCGCATAGGGTTTCTCTCTCCTCCTCCACCGTCTGTCCTACGGAGTCCATTTTCGATTTCATCAAATTAGGGTTTCCAGATTGGACCTGCTCCCTACCCGATTCTCTTGGATCCATTCGTTATATTGGTGTCACCGAGGGAGATGAGGTTTCTTTGCAGAAGGCGCTGAATATAGTTCACAAGAATAATCATGAGTATGTAGCTGTACTCTTCTATGCATCGTGGTGCCCTTTCTCTCGGGTATTTAGACCAATTTTCTCCGTCCTCTCCTCCTTGCATCCTTCCATTCCTCATTTTGCTATTGAAGAATCATCTGTTAGGCCAAGCATACTATCCAAATATGGTGTCCACGGTTTCCCTACACTATTCATTTTGAATTCCACTATGCGTGTGCGTTATCATGGATCTCGGACCCTTGGCTCTCTCATTGGCTTCTACAGTGATGTTACTGGTAAGGTCCATTTTTTTCACTCCATATGCTTTGAGATTTTTGTTTTATTATCTTTGTTTTTTCTTTGTATAAATCAATTTTAA 612 0.4314 MMMRVWGSEIVFAMLLCGTLSCTAQQPHRVSLSSSTVCPTESIFDFIKLGFPDWTCSLPDSLGSIRYIGVTEGDEVSLQKALNIVHKNNHEYVAVLFYASWCPFSRVFRPIFSVLSSLHPSIPHFAIEESSVRPSILSKYGVHGFPTLFILNSTMRVRYHGSRTLGSLIGFYSDVTGKVHFFHSICFEIFVLLSLFFLCINQF. 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02813 203 PANTHER 5'-ADENYLYLSULFATE REDUCTASE-LIKE 4-RELATED 1 177 IPR044606 -
Seca4g02813 203 Gene3D Glutaredoxin 69 180 - -
Seca4g02813 203 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Seca4g02813 203 Pfam Thioredoxin 87 170 IPR013766 -
Seca4g02813 203 SUPERFAMILY Thioredoxin-like 88 176 IPR036249 -
Seca4g02813 203 ProSiteProfiles Thioredoxin domain profile. 47 177 IPR013766 -
Seca4g02813 203 CDD PDI_a_ERp44_like 73 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02813 Seca-Chr4 48633210 48635949 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02813 - - lja:Lj0g3v0208169.2 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02813 4 48633210 48635949 Seca4g02813 4 48633210 48635949 ECH