Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02803 ATGGCAATGTCATTGCCAGCAAGGGATCTCTGTCAGCAACAACATTCAAATTCTCTTCCTATTTTCTTCAGTCCGAATTCCGATTTTGGTTCATTCACCGCAGGCGTTGGGGGGTTATTTCTCGACCCCACAATTTCCGATTCCCTTGTTCGTTTCATTTCGTCGAGGATTCCTGCTTCTTTCGAACCCAATCCTCACCGTCCACGTCGGAGGGTTCCGGGTGGGTGTTTTTTATCGGTGAGCTTGCCAAGTACTACTAAACTTGGTGCCGAACCCAAGTCATACGTATTGCAAAATGGTGACCATGTCCCCGATAAGGACACCACTTCGGACGGTGTCGTTCAGCAAAAAAGGGTTAGGGTAAGAAGAGGCAATGCTGTCAACACCACCAAGCATCTATGGGCTGGTGCTATAGCTGCTATGGTTTCTAGAACTTGTGTTGCTCCACTTGAAAGACTTAAGCTGGAGTATATAGTTCGTGGTGAGAAGAGGAATATCTTTGAGCTTATTAGAACAATTGCCACTTCTCAAGGTTTGAGAGGCTTTTGGAAGGGGAACCTTGTGAATATTCTGCGAACGGCTCCATTTAAAGCAGTTAACTTTTGTGCTTATGATACGTATAGAAAGCAGCTACTTAGATTCTCCGGAAATGAGGAAACTACCAATTTTGAGAGGTTTATTGCTGGTGCTGCTGCTGGGATTACTGCAACTATTATTTGTCTGCCACTTGACACTATCCGGACCAAGCTGGTGGCACCTGGTGGAGAAGCCTTGGGCGGTGTAGTTGGTGCTTTCCAATACATGATTCGAACTGAAGGATTCTTTTCTCTTTACAAGGGTTTAGTACCATCACTAATAAGTATGGCTCCTTCCGGTGCAGTGTTTTATGGTGTATATGATATACTGAAGTCAGCTTATCTGCATTCCCCTGAAGGAATGAAGAGAATCCATAACATGCATAAACAGGGACAGGAATTGAGTGCCTTTGATCAGCTTGAGTTGGGGCCAGTAAGGACATTGTTTTATGGGGCTATTGCTGGTGCATGTGCAGAAGCTGCTACATACCCATTTGAAGTGGTGAGGAGGCAACTTCAATTGCAAGTCCTGTCTACTAAATTAAGTACTCTAGCAACTTGTGTTAAAATAGTGGAACAAGGAGGCATTCCAGCTCTATATGCAGGGCTTTTTCCCAGCTTATTACAGGTAGTACTTCCTTCAGCTTCAATAAGTTACTTTGTCTATGAGTTCATGAAGATTGTTCTCAAAGTGGAGTAG 1275 0.4416 MAMSLPARDLCQQQHSNSLPIFFSPNSDFGSFTAGVGGLFLDPTISDSLVRFISSRIPASFEPNPHRPRRRVPGGCFLSVSLPSTTKLGAEPKSYVLQNGDHVPDKDTTSDGVVQQKRVRVRRGNAVNTTKHLWAGAIAAMVSRTCVAPLERLKLEYIVRGEKRNIFELIRTIATSQGLRGFWKGNLVNILRTAPFKAVNFCAYDTYRKQLLRFSGNEETTNFERFIAGAAAGITATIICLPLDTIRTKLVAPGGEALGGVVGAFQYMIRTEGFFSLYKGLVPSLISMAPSGAVFYGVYDILKSAYLHSPEGMKRIHNMHKQGQELSAFDQLELGPVRTLFYGAIAGACAEAATYPFEVVRRQLQLQVLSTKLSTLATCVKIVEQGGIPALYAGLFPSLLQVVLPSASISYFVYEFMKIVLKVE. 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02803 424 ProSiteProfiles Solute carrier (Solcar) repeat profile. 127 210 IPR018108 -
Seca4g02803 424 FunFam Mitochondrial substrate carrier family protein 126 424 - -
Seca4g02803 424 Gene3D Mitochondrial carrier domain 123 423 IPR023395 -
Seca4g02803 424 SUPERFAMILY Mitochondrial carrier 125 417 IPR023395 -
Seca4g02803 424 PRINTS Mitochondrial carrier protein signature 185 205 IPR002067 GO:0055085
Seca4g02803 424 PRINTS Mitochondrial carrier protein signature 235 253 IPR002067 GO:0055085
Seca4g02803 424 PRINTS Mitochondrial carrier protein signature 132 145 IPR002067 GO:0055085
Seca4g02803 424 PRINTS Mitochondrial carrier protein signature 145 159 IPR002067 GO:0055085
Seca4g02803 424 PRINTS Mitochondrial carrier protein signature 343 365 IPR002067 GO:0055085
Seca4g02803 424 PRINTS Mitochondrial carrier protein signature 278 296 IPR002067 GO:0055085
Seca4g02803 424 ProSiteProfiles Solute carrier (Solcar) repeat profile. 334 420 IPR018108 -
Seca4g02803 424 PANTHER SOLUTE CARRIER FAMILY 25 123 423 - -
Seca4g02803 424 Pfam Mitochondrial carrier protein 127 212 IPR018108 -
Seca4g02803 424 Pfam Mitochondrial carrier protein 220 307 IPR018108 -
Seca4g02803 424 Pfam Mitochondrial carrier protein 334 421 IPR018108 -
Seca4g02803 424 ProSiteProfiles Solute carrier (Solcar) repeat profile. 220 305 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02803 Seca-Chr4 48479155 48484263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02803 115 402 Organic Solute Cotransporters AT5G64970 77.778 5.13e-164 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02803 - - gmx:100812227 657.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02803 4 48479155 48484263 Seca4g02803 4 48479155 48484263 ECH