Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02766 ATGGCGGGCATTGGGCGCGGGAATGGGTACATAAATGGTGTACTACCAAATAGGCACCCTGCCGCAATATCTGAAATAGATGAATACTGCAATGCCCTTGGGGGAAACAAGCCAATTCATAGCATATTAATTGCAAACAATGGAATGGCAGCAGTCAAGTTTATACGTAGTGTAAGGAGCTGGGCCTTGGAGACATTTGGCACAGAGAAGGCTATCTTGTTGGTTGCCATGGCTACTCCCGAGGACATGAGAATCAATGCAGAACATATCAGAATAGCTGACCAATTTGTGGAAGTACCTGGAGGGACCAATAACAATAACTATGCCAATGTGCAGCTTATTGTAGAGATAGCTGAGATAACCCGTGTTGATGCCGTGTGGCCTGGTTGGGGTCATGCATCAGAAAATCCTGAGCTTCCAGATGCGTTAAAAGCAAAAGGAACTGTATTTCTTGGACCTCCTGCTATATCTATGGCTGCATTGGGAGATAAAATTGGTTCGTCATTGATTGCTCAAGCAGCAGAAGTGCCAACCCTTCCATGGAGCGGTTCTCATGTGAAAATTCCTCCTGAGAGTTCCTTGATTACTATTCCTGATGAAATTTATCGGCAAGCATGTGTTTATACAACAGAAGAAGCAGTTGCGAGTTGTCAAGTTGTAGGATACCCTGCAATGATCAAGGCATCTTGGGGTGGTGGCGGTAAAGGCATAAGAAAGGTTCATAATGATGATGAGGTAAGGGCATTGTTCAAACAAGTTCAAGGTGAAGTTCCTGGCTCACCTATATTTATAATGAAGGTTGCATCCCAGAGCCGACATCTAGAAGTGCAGTTACTTTGTGATCAGTATGGAAATGTTGCAGCTTTGCATAGCCGTGATTGCAGTGTTCAAAGGAGGCACCAAAAGATCATTGAAGAGGGTCCTATTACTGTAGCACCTCCGGAAACGGTGAAACAACTAGAACAGGCAGCTAGGAGATTGGCTAAATCTGTAAATTATGTTGGGGCAGCTACTGTTGAGTATCTTTTTAGTATGGAAACTGGCGAGTACTACTTCTTAGAGTTGAACCCTCGACTACAGGTTGAGCATCCTGTTACTGAATGGATAGCAGAGATAAGTCTGCCAGCAGCTCAAGTGGCCATTGGAATGGGTATCCCTCTCTGGCAAATTCCTGAGATAAGGCGTTTCTATGGGGTAGAACATGGTGGAGGGAATGATGCTTGGAGGAAAACATCAGTTTTAGCTACCCCTTTTGATTTTGACAAAGCACAATCTACAAGGCCAAAAGGTCATTGTGTGGCTGTGCGAGTGACTAGTGAGGACCCCGATGATGGTTTTAAGCCTACAAGTGGGAAAGTGCAGGAGCTCAGCTTTAAAAGCAAGCCAAATGTGTGGGCATACTTCTCTGTTAAGTCTGGAGGAGGAATCCATGAATTCTCAGATTCTCAGTTTGGGCACGTATTTGCTTTTGGAGAATCTAGGGCTTTAGCAATTGCAAATATGGTTTTGGGGCTGAAGGAGATTCAGATTCGGGGAGAAATTCGTACCAATGTTGATTACACCGTTGATCTTCTGAATGCTTCAGACTACAGAGAAAACAAAATTCACACAGGATGGCTGGACAGTAGAATTGCAATGAGGGTTAGAGCAGAAAGGCCTCCCTGGTATCTTTCTGTTGTTGGAGGGGCACTCTATAAAGCTTCTGCTAGCAGTGCAGCTTTGGTTTCAGACTATGTCGGCTATCTTGAAAAGGGGCAAATCCCTCCTAAGCACATATCACTTGTACATTCTCAAGTGTCCTTGAACATTGAAGGAAGCAAATATACGATTGACATGGTACGGGGAGGACCTGGGAGTTACAGATTGAGAATGAATCAATCAGAAATAGAAGCAGAGATACATACTTTACGTGATGGAGGCTTGCTGATGCAGGCAAGTATTTTGGATGGAAACAGTCATGTAATATATGCAGAAGAAGAAGCAGCTGGAACTCGCCTTCTAATAGATGGAAGGACTTGTTTGCTTCAGAATGATCATGATCCATCAAAGTTAGTTGCGGAGACACCATGCAAGCTTCTGAGATATTTGGTTGTGGATGATAGTCATATTGATGCTGACACACCATATGCTGAAGTTGAGGTCATGAAGATGTGCATGCCTCTTCTTTCGCCTGCTTCTGGGATTATTCATTTTAAAATGTCTGAAGGTCAAGCAATGCAGGCTGGTGAACTTATAGCAAGGCTTGATCTAGATGATCCTTCAGCTGTAAGAAAGGCAGAACCCTTCAGTGGGAGTTTCCCAGTCCTGGGCCCTCCTACTGCAATTTCAGGTAAAGTACATCAGAAATGCGCTGCAAGTTTAAATGCTGCACGGATGATTCTTGCTGGCTATGAGCACCATATTGATGATGTTGTGCAAAGTTTGCTCCATTGCCTTGACAGTCCTGAATTGCCTTTCCTTCAATGGCAAGAGTGCTTCGCAGTTCTTGCAAACCGTCTCCCCAAAGATCTAAAAAATGAGTTGGAATCAAAATATAAGGAGTTCGAGAGGATTTCAAGCTCCCAAATTGTTGACTTCCCTGCTAAATTATTGAAGGGAATTCTTGATGCTCATCTTTCCTCCTGTCCTGACAAAGAAAAGGGAGCCCAAGAAAGACTAGTTGAACCTCTGATGAGTCTTGTGAAATCTTATGAGGGTGGAAGAGAGAGCCATGCCCATAAAATTGTTCAATCCCTTTTTGAAGAGTATCTTTTTGTTGAAGAACTATTTAGTGATAATATACAGGCTGATGTAATTGAACGTCTTCGTCTTCAATACAAGAAAGATTTGTTGAAGATTGTAGATATAGTGCTTTCTCATCAGGGTGTCAAGAGTAAAAATAAGCTGATACTGCGACTAATGGATAAACTGGTTTACCCTAACCCTGCTGCCTATAGGGATCAATTAATCCGGTTCTCTCAACTCAACCATACAAATTATTCGGAGTTGGCTCTTAAGGCAAGTCAGCTGCTGGAACAAACTAAATTGAGTGAACTCCGATCCAGCATTGCTAGAAGTCTTTCTGAACTAGAGATGTTCACTGAGGATGGTGAAAATATTGATACTCCCAGGAGGAAGAGTGCCATTAATGATCGGATGGAGGACCTTGTGAGTGCTCCTTTGGCAGTTGAAGATGCCCTTGTAGGTTTATTTGATCACAGTGATAACACCCTTCAAAGGAGGGTTGTGGAAACTTATATACGCAGGCTCTACCAGCCATATCTTGTCAAAGGGAGTGTCAGGATGCAGTGGCACAGATCTGGTCTTATTGCTACATGGGAGTTCTTTGAAGAGTACATTGAACGGAAGAATGGGGTTGAAGAGCAGACGTTGGATAAAACACTGGTGGAGAAACATAGTGAGAAGAAATGGGGAGTGATGGTTATAATTAAATCTCTTCAATTTTTGCCTGCAATTATCAGTGCTGCATTAAGGGAAGCAACCAATAACCTTCACGAAGCACTTACAAGTGGTTCTGGTGACTCTGTTAACTATGGTAATATGATGCATATTGGATTAGTGGGCATCAACAACCAGATGAGTTTACTGCAAGACAGTGGTGATGAGGATCAGGCTCAAGAAAGAATCAATAAGTTAGCCAAAATACTTAAAGATCAGGAAGTAGGGTCCACAATACATGCTGCAGGTGTTGGAGTAATTAGCTGTATCATACAAAGGGATGAAGGGCGTGCTCCAATGAGGCACTCCTTTCACTGGTCAGCAGAAAAGCTCTATTATGAAGAGGAACCTCTGCTGCGTCATCTAGAACCTCCCCTATCTATTTATCTTGAATTGGACAAACTTAAAGGCTATGAGAATATACGGTACACCCCATCTAGAGATCGTCAATGGCACCTGTACACAGTTGTGGATCACAAGCCACAACCAATTCAAAGAATGTTTCTTCGAACACTTCTAAGACAGCCAACCACAAATGAAGGATTCTCTTCATATCAAAAGCTGGATGCAGAATCATCTCGTACCCTATTGGCTATGTCCTTTACTTCAAGGAGCATTTTTAGGTCCTTGATGGCTGCAATGGAGGAGTTGGAACTTAATGCACACAATGCTGCCATCAAATCTGAACACGCTCATATGTACCTCTATATCATACGGGAGCAACAAATAGATGATCTTGTGCCTTATCCCAAGAGAATTAACATAGCTGCTGGCCAAGAAGAAACAACAGTTAAGGCAATCTTGGAAGAACAGGCACGGGAAATCCATTCATCTGTTGGTGTTAGAATGCATAGATTAGGGGTTGTTGTGTGGGAAGTCAAGCTCTGGATGGCAGCCTGTGGACAGGCAAATGGTGCTTGGAGGGTCATTGTAAACAATGTGACTGGTCATACATGCACTGTACATATATACCGAGAAATGGAGGATACTGCCACTCATAAAGTGGTATATAGTTCAGTCACTGAGAAGGGTCCGCTGCATGGTGTACCAGTGAATGAAAACTATCAGCCTTTGGGAGTTATTGACCGGAAACGTCTTTCAGCAAGAAAGAACAGCACCACATACTGCTACGATTTTCCCCTGGCATTTGAAACAGCCTTGGAACAGTCATGGGCAATCCAACAGCCAGGAATTCAAAGAGCCAAAGATAAAGATCTTCTAAAAGTAACAGAGCTTAAATTTGCTGACAAAGAAGGTAGCTGGGGTACTCCTCTTGTTCCTGTGGAGCGTCCTGCTGGACTCAATGATGTAGGCATGATAGCCTGGTTTATGGAAATGTGTACCCCCGAGTTCCCATCTGGAAGGACAATATTGGTTGTTGCAAATGATGTGACCTTCAAGGCTGGTTCTTTTGGCCCAAGAGAGGATGCATTCTTTCGTGCAGTAACTGATCTTGCATGTGATAAAAAACTACCTTTAATTTATTTAGCAGCAAATTCTGGTGCCCGTTTAGGCGTAGCTGAGGAAGTCAAAACCTGTTTCAGAGTTGGTTGGTCTGAGGAATCTAACCCTGAGCATGGTTTTCAGTATGTGTATTTAACACCTGAGGATTATGCTCGGATTGGATCATCAGTGATAGCACATGAATTAAAGCTTGAAAGTGGAGAAACCAGATGGGTTATAGATACCATTGTTGGCAAGGAGGATGGCCTGGGGGTTGAAAACTTGAGTGGCAGTGGGGCCATTGCTGGTGCCTATTCAAGGGCATACAAGGAAACTTTTACATTGACATATGTGACTGGTAGGACTGTTGGGATAGGTGCTTATCTTGCTAGGCTTGGGATGAGATGCATACAGAGGCTTGATCAGCCGATAATTCTTACTGGTTTTTCAGCATTAAACAAACTTCTTGGTCGGGAGGTATACAGCTCTCACATGCAACTTGGTGGACCTAAAATCATGGCAACTAATGGAGTTGTTCATCTTACAGTTTCGGATGACCTTGAAGGTGTTTCTTCTATTTTGAAGTGGCTTAGCTACATTCCTTCTCATGTAGGTGGTGAGCTTCCCATTGTAAAGCCCCTTGATCCTCCAGAAAGACTAGTGGAGTATTTCCCGGAAAACTCATGTGATCCCCGTGCTGCCATTTCTGGAACTGTAGACGGCAACGGAAGATGGCTGGGTGGCATTTTTGACAAGGACAGCTTTGTGGAGACACTAGAGGGATGGGCAAGAACAGTTGTTACAGGAAGGGCAAAGCTTGGAGGAATCCCTGTGGGAATTGTTGCTGTAGAAACACAGACAGTTATGCAAATAATACCTGCTGATCCAGGCCAGCTTGATTCTCATGAAAGGGTTGTTCCTCAAGCCGGGCAAGTGTGGTTTCCTGATTCGGCGACCAAGACAGCCCAAGCAATATTGGATTTCAACAGAGAAGAACTCCCTCTTTTCATTCTTGCAAACTGGAGAGGCTTTTCAGGTGGCCAAAGGGACCTTTTTGAAGGAATCCTTCAGGCTGGTTCAACTATTGTGGAGAACCTTAGAACATACAAGCAACCCATATTTGTATACATTCCAATGATGGGTGAACTCCGTGGCGGGGCATGGGTTGTTGTTGACAGTCGAATCAATTCAGACCACATTGAGATGTATGCTGATCGAACAGCCAAAGGTAATGTCCTTGAACCAGAAGGAATGATTGAGATCAAATTTAGAACAAGAGAATTGTTGGAGTGTATGGGTAGACTTGATCAACAGTTGATAAATCTGAAGGCAAAACTTCAGGAAGCCAAGAGTAACAAGGACCTTGGAACCATTGAATCCCTGCAGCAGCAGATCAAATCCCGTGAGAAACAGCTTTTGCCTATGTACACACAGATAGCTACCAAATTTGCTGAATTGCATGATACTTCCTTAAGAATGGCTGCAAAGGGTGTAATTAGAGAAGTTCTGGACTGGGGTAACTCCCGTGCTGTCTTCTACCGGAGACTGCACAGGAGAATTGGTGAGCAGTCACTGATCAACAGTGTGAGAGATGCTGCTGGTGACCGTTTGTCGCATATATCTGCAATGAACTTGCTCAAAAACTGGTATTTGAATTCTGATATTGCCAAAGGTAGTGAAGATGCTTGGTTTGATGATGAAGCCTTCTTCAGATGGAAGGATAATCCTGCAAACTATGAAGACAAACTAAAGGAATTGCGTGTCCAGAAACTGTTGCTTCAATTGACAAATATTGGTGACTCAATTCTAGATTTGCAAGCTCTACCTCAAGGACTTGCTGCCCTTTTAAGCAAGTTGGAGGCATCAAGTCGTGAGAAGTTGACTGATGAACTTCGCAGGGTACTTGGTTAG 6792 0.4348 MAGIGRGNGYINGVLPNRHPAAISEIDEYCNALGGNKPIHSILIANNGMAAVKFIRSVRSWALETFGTEKAILLVAMATPEDMRINAEHIRIADQFVEVPGGTNNNNYANVQLIVEIAEITRVDAVWPGWGHASENPELPDALKAKGTVFLGPPAISMAALGDKIGSSLIAQAAEVPTLPWSGSHVKIPPESSLITIPDEIYRQACVYTTEEAVASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGSPIFIMKVASQSRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPPETVKQLEQAARRLAKSVNYVGAATVEYLFSMETGEYYFLELNPRLQVEHPVTEWIAEISLPAAQVAIGMGIPLWQIPEIRRFYGVEHGGGNDAWRKTSVLATPFDFDKAQSTRPKGHCVAVRVTSEDPDDGFKPTSGKVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGESRALAIANMVLGLKEIQIRGEIRTNVDYTVDLLNASDYRENKIHTGWLDSRIAMRVRAERPPWYLSVVGGALYKASASSAALVSDYVGYLEKGQIPPKHISLVHSQVSLNIEGSKYTIDMVRGGPGSYRLRMNQSEIEAEIHTLRDGGLLMQASILDGNSHVIYAEEEAAGTRLLIDGRTCLLQNDHDPSKLVAETPCKLLRYLVVDDSHIDADTPYAEVEVMKMCMPLLSPASGIIHFKMSEGQAMQAGELIARLDLDDPSAVRKAEPFSGSFPVLGPPTAISGKVHQKCAASLNAARMILAGYEHHIDDVVQSLLHCLDSPELPFLQWQECFAVLANRLPKDLKNELESKYKEFERISSSQIVDFPAKLLKGILDAHLSSCPDKEKGAQERLVEPLMSLVKSYEGGRESHAHKIVQSLFEEYLFVEELFSDNIQADVIERLRLQYKKDLLKIVDIVLSHQGVKSKNKLILRLMDKLVYPNPAAYRDQLIRFSQLNHTNYSELALKASQLLEQTKLSELRSSIARSLSELEMFTEDGENIDTPRRKSAINDRMEDLVSAPLAVEDALVGLFDHSDNTLQRRVVETYIRRLYQPYLVKGSVRMQWHRSGLIATWEFFEEYIERKNGVEEQTLDKTLVEKHSEKKWGVMVIIKSLQFLPAIISAALREATNNLHEALTSGSGDSVNYGNMMHIGLVGINNQMSLLQDSGDEDQAQERINKLAKILKDQEVGSTIHAAGVGVISCIIQRDEGRAPMRHSFHWSAEKLYYEEEPLLRHLEPPLSIYLELDKLKGYENIRYTPSRDRQWHLYTVVDHKPQPIQRMFLRTLLRQPTTNEGFSSYQKLDAESSRTLLAMSFTSRSIFRSLMAAMEELELNAHNAAIKSEHAHMYLYIIREQQIDDLVPYPKRINIAAGQEETTVKAILEEQAREIHSSVGVRMHRLGVVVWEVKLWMAACGQANGAWRVIVNNVTGHTCTVHIYREMEDTATHKVVYSSVTEKGPLHGVPVNENYQPLGVIDRKRLSARKNSTTYCYDFPLAFETALEQSWAIQQPGIQRAKDKDLLKVTELKFADKEGSWGTPLVPVERPAGLNDVGMIAWFMEMCTPEFPSGRTILVVANDVTFKAGSFGPREDAFFRAVTDLACDKKLPLIYLAANSGARLGVAEEVKTCFRVGWSEESNPEHGFQYVYLTPEDYARIGSSVIAHELKLESGETRWVIDTIVGKEDGLGVENLSGSGAIAGAYSRAYKETFTLTYVTGRTVGIGAYLARLGMRCIQRLDQPIILTGFSALNKLLGREVYSSHMQLGGPKIMATNGVVHLTVSDDLEGVSSILKWLSYIPSHVGGELPIVKPLDPPERLVEYFPENSCDPRAAISGTVDGNGRWLGGIFDKDSFVETLEGWARTVVTGRAKLGGIPVGIVAVETQTVMQIIPADPGQLDSHERVVPQAGQVWFPDSATKTAQAILDFNREELPLFILANWRGFSGGQRDLFEGILQAGSTIVENLRTYKQPIFVYIPMMGELRGGAWVVVDSRINSDHIEMYADRTAKGNVLEPEGMIEIKFRTRELLECMGRLDQQLINLKAKLQEAKSNKDLGTIESLQQQIKSREKQLLPMYTQIATKFAELHDTSLRMAAKGVIREVLDWGNSRAVFYRRLHRRIGEQSLINSVRDAAGDRLSHISAMNLLKNWYLNSDIAKGSEDAWFDDEAFFRWKDNPANYEDKLKELRVQKLLLQLTNIGDSILDLQALPQGLAALLSKLEASSREKLTDELRRVLG. 2264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02766 2263 Pfam Acetyl-CoA carboxylase, central region 749 1493 IPR013537 GO:0003989|GO:0005524|GO:0006633
Seca4g02766 2263 FunFam acetyl-CoA carboxylase isoform X2 14 163 - -
Seca4g02766 2263 CDD biotinyl_domain 684 748 - -
Seca4g02766 2263 FunFam acetyl-CoA carboxylase isoform X2 1833 2231 - -
Seca4g02766 2263 Gene3D - 269 527 - -
Seca4g02766 2263 ProSiteProfiles Biotin carboxylation domain profile. 38 545 IPR011764 -
Seca4g02766 2263 PANTHER ACETYL-COA CARBOXYLASE, ISOFORM A 15 2260 - -
Seca4g02766 2263 SUPERFAMILY ClpP/crotonase 1503 1829 IPR029045 -
Seca4g02766 2263 SUPERFAMILY Rudiment single hybrid motif 429 542 IPR011054 -
Seca4g02766 2263 ProSiteProfiles ATP-grasp fold profile. 191 385 IPR011761 GO:0005524|GO:0046872
Seca4g02766 2263 FunFam Acetyl-CoA carboxylase 1 679 750 - -
Seca4g02766 2263 Pfam Biotin carboxylase C-terminal domain 435 541 IPR005482 -
Seca4g02766 2263 Gene3D - 164 205 - -
Seca4g02766 2263 Pfam Carbamoyl-phosphate synthase L chain, ATP binding domain 206 388 IPR005479 GO:0005524
Seca4g02766 2263 Gene3D - 13 163 - -
Seca4g02766 2263 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 162 400 - -
Seca4g02766 2263 Coils Coil 2059 2079 - -
Seca4g02766 2263 Gene3D Biotin dependent carboxylase carboxyltransferase 1651 1715 - -
Seca4g02766 2263 ProSitePatterns Carbamoyl-phosphate synthase subdomain signature 2. 352 359 IPR005479 GO:0005524
Seca4g02766 2263 Pfam Biotin carboxylase, N-terminal domain 39 158 IPR005481 -
Seca4g02766 2263 Pfam Biotin-requiring enzyme 683 748 IPR000089 -
Seca4g02766 2263 Gene3D - 679 750 - -
Seca4g02766 2263 SMART Biotin_carb_C_2 434 541 IPR005482 -
Seca4g02766 2263 ProSitePatterns Biotin-requiring enzymes attachment site. 706 723 IPR001882 -
Seca4g02766 2263 FunFam acetyl-CoA carboxylase isoform X1 182 267 - -
Seca4g02766 2263 SUPERFAMILY PreATP-grasp domain 19 161 IPR016185 -
Seca4g02766 2263 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase C-terminal domain profile. 1843 2158 IPR011763 GO:0016874
Seca4g02766 2263 SUPERFAMILY ClpP/crotonase 1834 2224 IPR029045 -
Seca4g02766 2263 Gene3D - 1501 1828 - -
Seca4g02766 2263 Gene3D - 1833 2232 - -
Seca4g02766 2263 Gene3D - 206 268 IPR013815 GO:0005524
Seca4g02766 2263 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase N-terminal domain profile. 1500 1839 IPR011762 -
Seca4g02766 2263 ProSiteProfiles Biotinyl/lipoyl domain profile. 675 749 IPR000089 -
Seca4g02766 2263 FunFam acetyl-CoA carboxylase 1-like 269 527 - -
Seca4g02766 2263 SUPERFAMILY Single hybrid motif 681 751 IPR011053 -
Seca4g02766 2263 Pfam Carboxyl transferase domain 1595 2147 IPR034733 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02766 Seca-Chr4 47672074 47687947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02766 5 2263 Acyl Lipid Metabolism Gene Families AT1G36160 81.388 0.0 3856
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02766 K11262 - gmx:100778658 4226.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02766 4 47672074 47687947 Seca4g02766 4 47672074 47687947 ECH