Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02758 ATGTCCTTTCTGGCGTTAAAGGGAGCTAAATCGGTGGACGTGGACTTGAAGCAGCAGAAAGCAACGGTGACTGGATATGTTGAGCCAAAGAAAGTGCTTAAAGCTGCTCAGTCTACAAAGAAGAAGGTTGAGCTATGGCCTTATGTTCCATACACTATGGTGGCTCACCCTTATGTTTCTCAAGCCTATGATAAGAAGGCGCCTCCTAATATGGTTAGAAAGGTCGCTGACACTACCAATATATCAGAGACCACCGTGGACGACAGCTATGTACAAATGTTCAGTGATGAAAACCCAAATGCCTGCTCCATCATGTAA 318 0.4497 MSFLALKGAKSVDVDLKQQKATVTGYVEPKKVLKAAQSTKKKVELWPYVPYTMVAHPYVSQAYDKKAPPNMVRKVADTTNISETTVDDSYVQMFSDENPNACSIM. 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02758 105 ProSiteProfiles Heavy-metal-associated domain profile. 1 44 IPR006121 GO:0046872
Seca4g02758 105 Pfam Heavy-metal-associated domain 4 41 IPR006121 GO:0046872
Seca4g02758 105 CDD HMA 5 44 IPR006121 GO:0046872
Seca4g02758 105 Gene3D - 2 44 - -
Seca4g02758 105 SUPERFAMILY HMA, heavy metal-associated domain 5 47 IPR036163 GO:0046872
Seca4g02758 105 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 6 103 IPR045181 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02758 Seca-Chr4 47446854 47447966 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02758 - - gmx:100782955 194.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02758 4 47446854 47447966 Seca4g02758 4 47446854 47447966 ECH