Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02751 ATGTCGAGAATCACTAAGTGGAAGATTGAGAAGACAAAAGTAAAGGTGGTTTTCCGGCTCCAGTTCCATGCTACACATATTCCACAATCTGGGTGGGATAAACTGTTTATTTCTTTCATCCCTGCTGACACTGGGAAGGCTACATCAAAGACAACCAAAGCAAATGTGAGAAATGGAACCTGCAAGTGGGGGGATCCAATCTATGAAACTACTAGACTCCTCCAAGACATCAAAACAAGACAATATGATGAGAAGCTTTACAAACTTGTTGTGGGGATGGGTTCTTCACGATCTAGCATCCTTGGCGAGGCCAACATAAATTTGGCTGATTTTGTTGATGCCTTGAAGCCTACAGCTGTCGCTTTGCCTCTTAATGGAAGTGAGCCTGGAGCCACTCTACATGTCACAGTGCAGCTTCTCACTTCCAAGACTGGTTTCAGAGAATTTGAACAGCAGAGGGAACTCAGAGAGAGGGGTCTACAGACAACCTCTGACCAAGGTACTCATGATGAATCTGCTGATAGCAAAGAGTCTTCTCCTGACCAGAATGTCAATAATCATATAAATAAGGTCAATTCAAGAGTGAAATTGAAAAGAGAATCTAAAGATCATCCCCGTGTTTCTTCACTGGAAGGAGAATCGGGGGTAAATGAAGAATATGCAGATTCAGCTGCTGGATTTGATGGCTCTTCTACTACTTCTGAAAGCATATATACTGAGAAGCATGATATCTCCAGTACACATGAAGTGGACAGCATTAAAAGCACAGTCTCTGGTGATATGGGTCTGCAATCCCTCAGTCAAAGTCCTCAGCCAGAAAAAGGAGAGGCACCTGATAATCAGCTTCTGTCACAGGGCAGTGATAGGGTCCATGGTTGGAACATAGACTATTCAGCTGCCAATAATTTGGCTGCTACTTCTGAAGATAGTGGCAGTAGCAGTCTTAAGGGAAATTTAGAAGCAGTTGAGTCATCTATTCTTGATCTAAAGCTGAAGGTGAGCTCTTTACAAAATCATGCTGATGAAATAGGTGTTGAAACACTCAAGTTTTCTGAGCAACTTACTGCTGAGATTTCGTCAGGAGAAGAGCTAGCAAAAGAGGTTGCTGTACTAAAATCAGAGTGTTCACAGTTTAAAGATGAATTTGAACAGCTTAAGAGCTCTAAGTTAAGCTTAGAATTTGCTCTCAAAGAACCTACTGAGACAGATCGAGAGAAATTATTCCATAATTTACAGCTTAAATGGCAAAAGGGGCTTTTTCTCATGGAAGATAAGTTAAGACATATTCAGAAGGTATCTATGGGATTTCCTGAGAGGGATTTTAGGTTCCTACATTTGGAGTTAGAAGGACTGGTTGAGATTTTGCAGGATCTCAAACAAGATTCTGGAGGGCCAATTTCAGGGACCAAAGTTTCCAATGGAAGAGAGAACAAGAATATGGATTTACATAAAGGTGAGCAATTTTTAACAGATATTGGGTCTGATGCAGGTTTATTTCAACCTGAAAGCATGACTCATTATCTTACTACACCAGGCCTTGTGTCTCATGAGTTTGATTCTGTAGATCCTACCCTTGCTATGAAGGAGAAAATTTTTGAACTTCTAAGAGAGCTAGATGAGTCCAAAACTGAAAGGGAAAGCCTTGTGCGGAAAATGGACCAGATGGAGTGCTACTATGAAGCTCTTATTCAGGAACTTGAGCAGAATCAAAGGCAGATGATGGCTGAGTTGCAGAACCTCAGAACTGAACATTCTACTTGCCTATACACAATTTCTGCTGGTAAGACTGAGATGGAGAGAATGCACCAGAATATGAATGAGCAGATAATGAAACTTTCTGAAGACAAGCGCATTTTGGAATCGCTCAACAATGAGTTTGAAAGAAGGGCTGTTTCTGCAGAATCAGCCCTTAAAAGAGCTAGACTGAATTATTCTATTGCTGTTGGTCAATTGCAAAAAGATCTAGAACTTCTTTCTTTCCAGGTTCTTTCTATGCATGAGACGAATGAGAATCTCATAAAGCAGACCTTTTCTGATTCTTCACTTCCAAACGATGATGCTTGCCCAGAACCAGTGAAATATCCTAGAAATTCAGAAGGTCATACTTCCAATCAATTGCTCTGTCAAAATCACAATTCTTCCTTACATAGACAACAGTTGGGTGAAGACATTTTACTAAGTGATTTGAAAAGATCACTTCAGTTGCAAGAGGGGTTATACAAACAGGTTGAAGAAGAAATCTGTCAGATGCATTTTGTAAATATATACTCAGATGTGTTTTCTAAGGCTTTGCAAGAAACATTGCTCGAAGCAAGTCTTGACATTCAACACATGAAAAAGGAAATTGTTCAACTCTCTCAGCAGCTGGAGCTTAAAAATGAATCCAACGAGTTACTGGTGCTGAGGTTGCAGAATGCTATGAATGATATCCTCTCATTAAATGAGTACAAGGAGATTTGCACAGCAAAGAGCAATGATATTGCTCACCAAAACCAAATTTTAGAGGCAAATTTAAAAGATCTTGCTCATGAGAATAATCTTCTTACTCAAAAAATTAACGAGTCAGAAGTTCTTTTGACAGAGTATAGAAGCTGTGAGGACAAATATGTGGCATGCAGTGCAGAAAACTCAGAGTTTAAGAGTTTATTGAAACAAGAGAGACTAGAAAATGATCATCTTCATGATGAAGTATCCGCTTTGACGGAAGAGTTAAAAGCTATGAGAGCTAAATTTGATGAGCTGGCTTCTATGAAGGATAATCTGCAGAATAATGTCATCCTTTTCTCTAATAAGTTGCAGAAATTGCTAGCATCATATGATGATAGATACAATGAACTTTCTCTTTGTAGTAGATCTGCTTGTTTGGATTCAGAATGTGAAGACTTAGAAGGTCTCTTATTGCAACTAGAAGAGCTGCAACAAAGTGCATTTGATAGGATTCTGCTACTCATTGAAGAGAAGAAAGTTTTGGTGAATGAAAAACTTATGGCTCAAGTATCTTTAAATACAGCAGAATCAGATGTTCTAGTCATGAAACAGAAGTTTGGGCATGATTTGCAAAACATGGTAAGTAGGATAAGTGTGTCTGGTGCCCTGTTGCAGAAACTTCAGTCAGATTTTGAGGTGATTGTTGACAGGATCAGTGCTGGTTTTAAAGCTGAAGAGATATACGCTCAGCATCACAATGAATTTTTATCTGGTCTTGATCATTTGGAAGCTGAGCTACAACAACTTAATTCCAGAAATCAGGACCTCGCTCAAGAAATTATAAAGCTAGGTACTTCATCTAGTGACCTCGAAATGTGTAAGCTGACCTTAGCAACAATTACAGAGGAAAAGAAAGCTTTGGAGTTGTATTTGCAGGACAAAACAGAAGAATCTGCAAAGATGTCATCTGAGCTTAATTTTTTGAAAGAAAACTTGTATTCTCTGCATAATGAGTTGCATGATGAAAAAATCTTCAGAGAAAAGTTGGAGAAAACAGTTACAGATCTTACCACAGAATTGGATGAGAAGCAATGCCAGCTGCAGGATTCTGATAAGAACAAACAAGAACTAGTCCATCTCAAGCAACTGATCACAAACTTAGAATTTGAGAAATCAAGAGTCTCAGATCTTCTGCAGAAATCTGAGAAAAGCCTTGAAGATGCTCTAAAAGAATCTTCTTCTATTAGTTGTCTGGAAATTTACTTATCTGAAATGGATGAGTTTTCAATAGCTACAGATGTTGTTATGACTTTTACCAGAACTCAGTTTGAAGGTCATATAGAGGAGCTTACTGAGAAACTTCATTACACTTGCAGGCAACTGGATATGCTTCACCAGAAGAATCTTGATGTAGAATCTGAATTGAATGCTTGTCTTTGCAGAGAATTGACTTGCATGGAAGAAAATATAACATTGTTAACAAGTCTTGACTTCCTAAAATCTGAGTTAGAGATCTATACTGCTCAGAGTAAAGCACTTATTGATCATAATAGTGCAATAATATCAGAGCTTAGGGAGCAGAGTAGGACAGAGAATGTCAGCACTACATATGTGCGTGAAAGCGAGTGTGTCCTTGAGGTTGCAAGGCTGGAGCAATTGCTGGCAAGTTGTAGCAGAGATAGTGAAGCACTCTTTTTGTCCAAGGAAGAAGCTGAATTCAAATCTATAGTTCTACAGGCCAAATTGGATGAATTGGAAACTGCAATGACTTCACTAAAACAATCAGATAGTGAGCTAATAAGGCTGCAAAACCAGTGTAATGAGCTTACCAAGAGGCTATCTGAGCAGGTTTTAAAGACAGAGGAGTTCAAGAATTTGTCCATTCATTTGAAGGAACTGAAAGACAAGGCTGAAGCTGAGTGTCTAAATACCCGGGACAGAAGAGGACATGAAGGACCACCAGTTGCTATGCAGGAGTCCTTAAGAATTGCGTTTATCAAGGAACAATATGAAACGAAGTTGCATGAACTAAAACAGCAGCTGTCTTTATCAAAAAAGCATAGTGAGGAAATGCTGTGGAAGCTACAAGATGCAATTGATGAAACTGAAAAACGAAAAAAGGCTGAAGCTTCTCAAATAAAAATTAATGAAGAGCTGGGAATGAAGATCTTGGAAATGGAGGCAGAGTTACAGGCTGTACTTTCTGACAAACGTAATTTGTTAAATGCATATGACCTGTTAAAAGCTGAAAAGGAGTGTTCAATGATAAGCCTCGAATGCTGTAAGCAAGAAAAGCAAGAGCTTGAAGCTTCTCTGCTAAAATGCAATGAGGAGAAGTCCAAAATTGAAGTAGAGCTTACCCTGGCGAAGGAATCGATTGAGACTTTGAAATCTAATATGAATGTTCTGAATGAGGGCAATGGTACATTCTCTTCTTCATTGAATCCTAAAGAAAAATCTACCCATGCACCTTGCATTCAAGAACCGGAGAGTGAAAATTCCCTCAACAATATACAACCAGAGGATCCTCTTTCCTTTAGAGTCATGAATGGATGCCAAACTCTTGGAACTGAAGAGGAGTTGCATCGTAATGAAGAAAAGAAGCACATGGCTTTAACTGAAAGTTTGAAATCTAGCATTGACCACTTGAGTAAAGAGTTGGAAAGGATGAAAAACGAGAATATGCTTCCTCCGGTAGATGGTCATAGCCATGAGCCAAGTTTTCCAGGTCTGCAAAGAGAACTGATGCAGCTACATGAGGCCAATCAAGAGTTAGGAAACATGTTCCCTGTGTTCAATAAAATCTCTATCAGTGGTAATGCATTAGAAAGGGTGCTTGCTTTGGAGATTGAGCTTGCTGAAGCATTGCAGGCCAAGAAGTCAATCATCCAATTTCAGAGTTCTTTCTTGAAACAGCACAGTGATGAAGAAGCAGTATTCAGAAGCTTCAGGGATATCAATGAGCTAATTAAAGATATGTTAGAACTAAAGGCAAGACATTCTGCTATCGAGACAGAACTGAAAGAGATGCATGACCGTTACTCTCAATTAAGTCTTCAGTTTGCAGAGGTTGAAGGTGAGAGACAAAAACTAATGATGACTCTTAAGAACACTCGAGCATCTAAGAAGGCTCCAAATTCAGCAACCTACTTTGGGGACCATTCCTTATAG 5598 0.3909 MSRITKWKIEKTKVKVVFRLQFHATHIPQSGWDKLFISFIPADTGKATSKTTKANVRNGTCKWGDPIYETTRLLQDIKTRQYDEKLYKLVVGMGSSRSSILGEANINLADFVDALKPTAVALPLNGSEPGATLHVTVQLLTSKTGFREFEQQRELRERGLQTTSDQGTHDESADSKESSPDQNVNNHINKVNSRVKLKRESKDHPRVSSLEGESGVNEEYADSAAGFDGSSTTSESIYTEKHDISSTHEVDSIKSTVSGDMGLQSLSQSPQPEKGEAPDNQLLSQGSDRVHGWNIDYSAANNLAATSEDSGSSSLKGNLEAVESSILDLKLKVSSLQNHADEIGVETLKFSEQLTAEISSGEELAKEVAVLKSECSQFKDEFEQLKSSKLSLEFALKEPTETDREKLFHNLQLKWQKGLFLMEDKLRHIQKVSMGFPERDFRFLHLELEGLVEILQDLKQDSGGPISGTKVSNGRENKNMDLHKGEQFLTDIGSDAGLFQPESMTHYLTTPGLVSHEFDSVDPTLAMKEKIFELLRELDESKTERESLVRKMDQMECYYEALIQELEQNQRQMMAELQNLRTEHSTCLYTISAGKTEMERMHQNMNEQIMKLSEDKRILESLNNEFERRAVSAESALKRARLNYSIAVGQLQKDLELLSFQVLSMHETNENLIKQTFSDSSLPNDDACPEPVKYPRNSEGHTSNQLLCQNHNSSLHRQQLGEDILLSDLKRSLQLQEGLYKQVEEEICQMHFVNIYSDVFSKALQETLLEASLDIQHMKKEIVQLSQQLELKNESNELLVLRLQNAMNDILSLNEYKEICTAKSNDIAHQNQILEANLKDLAHENNLLTQKINESEVLLTEYRSCEDKYVACSAENSEFKSLLKQERLENDHLHDEVSALTEELKAMRAKFDELASMKDNLQNNVILFSNKLQKLLASYDDRYNELSLCSRSACLDSECEDLEGLLLQLEELQQSAFDRILLLIEEKKVLVNEKLMAQVSLNTAESDVLVMKQKFGHDLQNMVSRISVSGALLQKLQSDFEVIVDRISAGFKAEEIYAQHHNEFLSGLDHLEAELQQLNSRNQDLAQEIIKLGTSSSDLEMCKLTLATITEEKKALELYLQDKTEESAKMSSELNFLKENLYSLHNELHDEKIFREKLEKTVTDLTTELDEKQCQLQDSDKNKQELVHLKQLITNLEFEKSRVSDLLQKSEKSLEDALKESSSISCLEIYLSEMDEFSIATDVVMTFTRTQFEGHIEELTEKLHYTCRQLDMLHQKNLDVESELNACLCRELTCMEENITLLTSLDFLKSELEIYTAQSKALIDHNSAIISELREQSRTENVSTTYVRESECVLEVARLEQLLASCSRDSEALFLSKEEAEFKSIVLQAKLDELETAMTSLKQSDSELIRLQNQCNELTKRLSEQVLKTEEFKNLSIHLKELKDKAEAECLNTRDRRGHEGPPVAMQESLRIAFIKEQYETKLHELKQQLSLSKKHSEEMLWKLQDAIDETEKRKKAEASQIKINEELGMKILEMEAELQAVLSDKRNLLNAYDLLKAEKECSMISLECCKQEKQELEASLLKCNEEKSKIEVELTLAKESIETLKSNMNVLNEGNGTFSSSLNPKEKSTHAPCIQEPESENSLNNIQPEDPLSFRVMNGCQTLGTEEELHRNEEKKHMALTESLKSSIDHLSKELERMKNENMLPPVDGHSHEPSFPGLQRELMQLHEANQELGNMFPVFNKISISGNALERVLALEIELAEALQAKKSIIQFQSSFLKQHSDEEAVFRSFRDINELIKDMLELKARHSAIETELKEMHDRYSQLSLQFAEVEGERQKLMMTLKNTRASKKAPNSATYFGDHSL. 1866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02751 1865 Coils Coil 883 924 - -
Seca4g02751 1865 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 974 - -
Seca4g02751 1865 Coils Coil 1567 1608 - -
Seca4g02751 1865 Coils Coil 1682 1702 - -
Seca4g02751 1865 Coils Coil 1061 1088 - -
Seca4g02751 1865 ProSiteProfiles C2 NT-type domain profile. 6 141 IPR019448 -
Seca4g02751 1865 Coils Coil 955 975 - -
Seca4g02751 1865 MobiDBLite consensus disorder prediction 1618 1648 - -
Seca4g02751 1865 Coils Coil 1155 1182 - -
Seca4g02751 1865 MobiDBLite consensus disorder prediction 155 287 - -
Seca4g02751 1865 Coils Coil 726 746 - -
Seca4g02751 1865 Coils Coil 1377 1428 - -
Seca4g02751 1865 Coils Coil 761 795 - -
Seca4g02751 1865 Coils Coil 368 388 - -
Seca4g02751 1865 MobiDBLite consensus disorder prediction 155 177 - -
Seca4g02751 1865 MobiDBLite consensus disorder prediction 226 240 - -
Seca4g02751 1865 Coils Coil 1106 1140 - -
Seca4g02751 1865 MobiDBLite consensus disorder prediction 193 209 - -
Seca4g02751 1865 Coils Coil 1532 1552 - -
Seca4g02751 1865 Coils Coil 1189 1209 - -
Seca4g02751 1865 Coils Coil 831 851 - -
Seca4g02751 1865 Coils Coil 1476 1514 - -
Seca4g02751 1865 Coils Coil 595 643 - -
Seca4g02751 1865 MobiDBLite consensus disorder prediction 250 287 - -
Seca4g02751 1865 Coils Coil 1795 1822 - -
Seca4g02751 1865 Coils Coil 531 583 - -
Seca4g02751 1865 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 11 140 IPR019448 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02751 Seca-Chr4 47245419 47259408 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02751 - - pcin:129299741 2368.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02751 4 47245419 47259408 Seca4g02751 4 47245419 47259408 ECH