Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02749 ATGGTTCATACTCATAGTGCTCTGAGACTAAAAGCAAGTAGATTCCTCTATCAACCTAGGGAAGCCCTCAGTTTGCCCATTACCATTAGTGGTTGTGTCTTTCATTCAGGAGTTAGATCAATGAAACAAACCAATTCTAATGTGGTTTCTAGTTTGTGTACTCTTGCTCCCAATGGGGAACCCTGCATCACAGATTCCTCATCAGTCAGTGAGAACCCTATCACTTCATCTATGAGTGTGAAATCTACCCCTGAAATTGAAAAGAAGTTTGTTCATCATGTTTATGATGCTATTGCTCCACATTTCAGTTCCACTCGGTTTGCCAAGTGGCCAAAGGTTGCCACATTTTTGTCATCTTTGCCTTCAGGATCTCTTGTCCTGGATGCAGGATGTGGGAATGGGAAATACTTAGGTTTAAATCAGGATTGCTTTTTTATAGGATGTGATATAAGTCATTCCTTGATTAAAATCTGCTCAGATAGAGGGCATGAAGTTCTGGTTGCAGATGCTGTGAATCTTCCTTACAGAACTGGTTTTGGTGATGCAGCTATATCCATAGCTGTGTTACATCATTTAAGCACTGAAGATAGAAGGAGAAAAGCAATAGAAGAATTAGTTCGAGTTGTTAAAAAGGGTGGCCTTGTTCTTATTACAGTTTGGGCTGTAGAACAAGAAGATAGATCACTGATTAACAAATGGACTCCGCTTACAGAAAAATATGTTGAAGAGTGGCCAGGACCAGGAATTCCCTGTGCTCGGGTTCCTTCATCTGCATCATTAGAAAGTATTCCAGAAAGTGAGGACAGTAGCTCAGGTGAGCACATGAAAGATTTCAATGAGTCAAAATTATCAAGAGATTTGAAGGAAGAAAAAATTTTGGAGAATCAACAGGAATATTTTGTTCCATGGCATTTACCCTATCATCGTGCAGAAATCAGTGGTGCTTCTGCTGATGCTCTTGCTACTGGTCTGGCAACTAAAGATGACAAAAAGGGGACTGTGGTGTATAATAGATATTATCATGTTTTTAGTGAAGGCGAGCTTGAAAGGTTTGGCGAATGGAATAAATAA 1071 0.3978 MVHTHSALRLKASRFLYQPREALSLPITISGCVFHSGVRSMKQTNSNVVSSLCTLAPNGEPCITDSSSVSENPITSSMSVKSTPEIEKKFVHHVYDAIAPHFSSTRFAKWPKVATFLSSLPSGSLVLDAGCGNGKYLGLNQDCFFIGCDISHSLIKICSDRGHEVLVADAVNLPYRTGFGDAAISIAVLHHLSTEDRRRKAIEELVRVVKKGGLVLITVWAVEQEDRSLINKWTPLTEKYVEEWPGPGIPCARVPSSASLESIPESEDSSSGEHMKDFNESKLSRDLKEEKILENQQEYFVPWHLPYHRAEISGASADALATGLATKDDKKGTVVYNRYYHVFSEGELERFGEWNK. 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02749 356 CDD AdoMet_MTases 126 222 - -
Seca4g02749 356 PANTHER UNCHARACTERIZED 75 351 - -
Seca4g02749 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 77 241 IPR029063 -
Seca4g02749 356 Pfam Methyltransferase domain 127 217 IPR013216 GO:0008168
Seca4g02749 356 Coils Coil 355 356 - -
Seca4g02749 356 Gene3D Vaccinia Virus protein VP39 102 355 IPR029063 -
Seca4g02749 356 MobiDBLite consensus disorder prediction 255 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02749 Seca-Chr4 47190247 47193493 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02749 K10770 - gmx:100784028 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02749 4 47190247 47193493 Seca4g02749 4 47190247 47193493 ECH