Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02741 ATGGCGGAAAGTTCAGAATTCATTGAGATGAAGCTGTCTCCGGTGAAGTTGGCAGCCGATAATTCCGAAGATCCGTTGGTGAAACCTAATCGGCGGCGACGGCGAGGAGATACGTGGGTGGTGTCAGTGTTGGTAATAATCCAGATTGGAGTTTTCATAGCCACAATGCTTGTGAATGATTGCTGGACCAATTCTCAAGGCGATTGCGCTCTCCCAGCCCTCGGAAGGTTCTCGTTTCAGCCTCTCCCTGAGAATCCCCTCTTAGGTCCTTCTCAGTCCAAGTTGGATGAAATGGGAGCTCTTCGAAGGAGCTTTTTGACAGAGTATCATCAAACTTGGCGTCTTTTCACGTTTCCATTTTTGCACGCTGGTCTCTTCCATCTGTTCATCAATCTCTGCAGTGTCATCTATGTGGGAATTCACCTAGAGCAGGAGTTTGGACCGCTAAGGATTGGTATAATCTATATACTGTCTGCTTTTGTGGGTGCTTTGGTGGCTTCTCTTTTTCTCCAAAACACCCCTACTGTTGGTTCTTCCGGTGCTTTATTTGGATTACTGGGAACATTGTTTTCGCAACTTGTTTGGAACTGGAAATTCCATACCAATACGATTTCACCGATTGCATCATTTGTCTTTGTCTTTGTGTGCAATTTCGTCCTTGGTTTTCTGCCTTATGTGGACAATTTTTCAAGCATTGGAGGTTTTATATCAGGATTCCTTCTTGGATCTGTTCTATTATTCAGCCCTCAGCTCCAACAGGTAGCTCCAAATAAAGGAGGGCTCATTCATTATGGGGTCAAAAGTTACATCAAGTTAAAGTTGAAGCAAAAGCTAGACAGACCAGTTCTCAGGATTGTTTCTCTTATCCTCTTCATCCTATTGTATGTTGTTTTTTCCTCTTGTTTTTTTCTAATTAATTTGCATGGCTAG 930 0.4333 MAESSEFIEMKLSPVKLAADNSEDPLVKPNRRRRRGDTWVVSVLVIIQIGVFIATMLVNDCWTNSQGDCALPALGRFSFQPLPENPLLGPSQSKLDEMGALRRSFLTEYHQTWRLFTFPFLHAGLFHLFINLCSVIYVGIHLEQEFGPLRIGIIYILSAFVGALVASLFLQNTPTVGSSGALFGLLGTLFSQLVWNWKFHTNTISPIASFVFVFVCNFVLGFLPYVDNFSSIGGFISGFLLGSVLLFSPQLQQVAPNKGGLIHYGVKSYIKLKLKQKLDRPVLRIVSLILFILLYVVFSSCFFLINLHG. 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02741 309 SUPERFAMILY Rhomboid-like 36 250 IPR035952 -
Seca4g02741 309 PANTHER RHOMBOID-RELATED 20 304 IPR002610 GO:0004252|GO:0006508|GO:0016020
Seca4g02741 309 Gene3D - 33 248 IPR035952 -
Seca4g02741 309 Pfam Rhomboid family 108 246 IPR022764 GO:0004252|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02741 Seca-Chr4 47083091 47086609 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02741 - - gmx:100775875 457.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02741 4 47083091 47086609 Seca4g02741 4 47083091 47086609 ECH